Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01561 ATGGGTAAGGCGTCAAAGTGGTTTCGCGGGCTTCTCGGTCTCAAAAAAACAGAGTATAGTGCCTCACCCGCCAAGCCACCCAAAGAGAAGCGCCGATGGAGCTTCGTTAAATCATCATCATCATACACAGAAAAAGACAACACCACTGCCGCCACGTGTCCACCACAAAGAGAAAACAACAACAGCAAGCACGCCATGGCAGTGGCAGCAGCCACCGCTGCGGTGGCGGAGGCGGCGGCAAGGAGAGCACTGCGTGCATTAAAGGGGTTGGTGAAGTTGCAAGCATTAGTGAGAGGTCACATTGAGAGGAAGCGGACAGCGGAGTGGCTGAAAAGAGTGCAAGCACTCTTACATGCACAGGCACAAGTCTCTGCAGGGTTGACCCTGCATGCCTCACCTTCGAGTTCAAAGTTATCTAGCCACCTCCATGGTCCAGATACACCCGAAAAATTTGAAAGCCCCATCAGATCTAAGAGCATGAAATATGAGCAGCCACCTATACTCAAGAGAAATGGCTCCAAATCCTGTGTCCAGATCAATGGCTATCAAGAGATGTGTGGGAGTAGATCAGAGAGTCAAGTAAATGAACAATCATGGAACTCAGGAATATCATTGATAAGAACTTTTAGCTCCAATGATGAAAGAAATGACAGGGTTCTTGAAATTGATACTGGAAAGCCACACTTCCCACTAAAGCGTAGAAACCTCTCTTATTCGGCAGGTTCTGATCATTATAGCAAGAGTTTGAACAGCACAAAGGAGTCAACATCTCTTCAATCTGGTCAAAGTCCATGTTGTGAAGTTCAGTCTCACAGTTACAGCTCACAAAAAGTCAACGAGGTTGAGGAGAGTCCATTCTGCACTGCTGACAATAGTCCACAATTTTTATCTGCCACTTCTAAAGATGATGGCTTCAAAAGAAGCCCTTTTACTCCTACTAGGAGTGATGGCTTTAGAAGCTACATTCGTGACTACCCAAGTTACATGGCATGCACTGAATCTTCAAAGGCAAAGGTGAGATCTCTGAGTGCCCCAAAACAAAGGCCTCAATGTGAGAGGTCTGGTTCATCTAATAGATACTCACTTAATGGATTTGATATGTCAAGATTGGCCACACAAAGGGCATTGCATGCAAGCTTCACCAACAAAGCATATCCAGGTTCTGGTCGTTTGGACAAGCTTGGTTGCTTGCAAGTTATTCAATGCCTGTCTCATATCACCATCAGCAGTGAAAATGATGGCTTCAAGTCCTTCAGGAACGTAGGGAACCTTCAACAAGAACACAATTCAGTAATGCATTTCCTCAATTTTGTTGAAGCAAATAGATGGCAACCGATATTATCAAATAGCAGCCATGGTGCTATGGCATGGCATGGCATTGTTCTCATGGTGGCTCATGGAAGCTATAACGGAAATTCTAACAGGGTCTCGTTATTGATGAATAAGTGA 1449 0.452 MGKASKWFRGLLGLKKTEYSASPAKPPKEKRRWSFVKSSSSYTEKDNTTAATCPPQRENNNSKHAMAVAAATAAVAEAAARRALRALKGLVKLQALVRGHIERKRTAEWLKRVQALLHAQAQVSAGLTLHASPSSSKLSSHLHGPDTPEKFESPIRSKSMKYEQPPILKRNGSKSCVQINGYQEMCGSRSESQVNEQSWNSGISLIRTFSSNDERNDRVLEIDTGKPHFPLKRRNLSYSAGSDHYSKSLNSTKESTSLQSGQSPCCEVQSHSYSSQKVNEVEESPFCTADNSPQFLSATSKDDGFKRSPFTPTRSDGFRSYIRDYPSYMACTESSKAKVRSLSAPKQRPQCERSGSSNRYSLNGFDMSRLATQRALHASFTNKAYPGSGRLDKLGCLQVIQCLSHITISSENDGFKSFRNVGNLQQEHNSVMHFLNFVEANRWQPILSNSSHGAMAWHGIVLMVAHGSYNGNSNRVSLLMNK 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01561 482 PANTHER IQ-DOMAIN 5-RELATED 1 363 - -
Pumo4g01561 482 MobiDBLite consensus disorder prediction 36 59 - -
Pumo4g01561 482 MobiDBLite consensus disorder prediction 18 59 - -
Pumo4g01561 482 MobiDBLite consensus disorder prediction 131 154 - -
Pumo4g01561 482 ProSiteProfiles IQ motif profile. 88 115 IPR000048 GO:0005515
Pumo4g01561 482 Pfam Protein of unknown function (DUF4005) 292 364 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01561 Pumo-Chr4 19682372 19690276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01561 66 395 IQD Protein Family AT4G23060 41.547 5.89e-47 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01561 - - gmx:100793587 645.195