Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01552 ATGGCGTCTTTGCAGCACCCCACAGCTTCCCTCCAATCCAAACACGTCCTAATCCCCCGAAACACCCTCACCCAGAAACCCATCCTCAACCTCTCCCTCCCGGGCACCACCTTCACCCCCCTCAAGCTCAAATTCGGCGTCGCCACCGCCATCACCCGCCGCTCCAGCGGCGCCTCGGGAGCGAGAATGTCGGCCACGGCGGCCTCGAGCTACGCCTCCGCCCTGGCCGACGTGGCGGCCGCGAACAACACGCTGGACGCGACCACCGCCGACATCGAGAAAGTCGACGAGATATTCTCGGACCAGCAGGTGTCGAAGTTTTTCACGAACCCCACCTTGGACGTGGAGGAGAAGCGCAAGCTGGTGGACGACATTGCCGAGTCCTCGGGCTTCCAACCCCACACGAGAAACTTCCTCTACATCCTCATCGACGCGCAGAGGATCGATCTCATCAACGAGATCGCCAAGGAGTTCGAGCTCTTCTATAACACCTTGACCGACACCGAGCTTGCGGTGGTCACCTCCGTCGTGAAGTTGGAGTCGCAGCACTTGGCCCAAATCGCGAAGCAGGTTCAGAAACTCACTGGGGCAAAAAATGTGAGGATTAAGACCCTCCTTGACCCAAGTTTGGTGGCGGGTTTCACTGTCAGGTTTGGGAATTCGGGGTCCAAGTTGATTGACATGAGCGTCAGGAAGCAGCTTGAGGATATTGCTGCTCAGCTTGAGTTGGGTGATATCACACTTGCCGTATGA 753 0.5803 MASLQHPTASLQSKHVLIPRNTLTQKPILNLSLPGTTFTPLKLKFGVATAITRRSSGASGARMSATAASSYASALADVAAANNTLDATTADIEKVDEIFSDQQVSKFFTNPTLDVEEKRKLVDDIAESSGFQPHTRNFLYILIDAQRIDLINEIAKEFELFYNTLTDTELAVVTSVVKLESQHLAQIAKQVQKLTGAKNVRIKTLLDPSLVAGFTVRFGNSGSKLIDMSVRKQLEDIAAQLELGDITLAV 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01552 250 Gene3D - 67 160 IPR026015 -
Pumo4g01552 250 PRINTS ATP synthase delta subunit signature 136 147 IPR000711 GO:0015986|GO:0046933
Pumo4g01552 250 PRINTS ATP synthase delta subunit signature 67 86 IPR000711 GO:0015986|GO:0046933
Pumo4g01552 250 PRINTS ATP synthase delta subunit signature 147 161 IPR000711 GO:0015986|GO:0046933
Pumo4g01552 250 PRINTS ATP synthase delta subunit signature 216 234 IPR000711 GO:0015986|GO:0046933
Pumo4g01552 250 PRINTS ATP synthase delta subunit signature 198 213 IPR000711 GO:0015986|GO:0046933
Pumo4g01552 250 Hamap ATP synthase subunit delta [atpD]. 63 243 IPR000711 GO:0015986|GO:0046933
Pumo4g01552 250 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 200 219 IPR020781 GO:0015986|GO:0016020|GO:0046933
Pumo4g01552 250 PANTHER ATP SYNTHASE DELTA CHAIN 53 242 IPR000711 GO:0015986|GO:0046933
Pumo4g01552 250 NCBIfam ATP synthase F1 subunit delta 68 241 IPR000711 GO:0015986|GO:0046933
Pumo4g01552 250 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 64 166 IPR026015 -
Pumo4g01552 250 Pfam ATP synthase delta (OSCP) subunit 68 241 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01552 Pumo-Chr4 19607299 19608397 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01552 1 249 Primary Pumps ATPases AT4G09650 60.241 1.82e-98 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01552 K02113 - gmx:100815063 372.089