Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01551 ATGACGAGTCAAGATGGGGCAGGTGCTTGGCCTGAATCCAAGAGTTTTAGTGATGAAGGGTTTGGACCGATCCCAAAACGGTGGCGTGGAATCTGTCAAACAGAAGATAAATTTCACTGCAACAGGAAGCTTATTGGAGCAAGATATTTTTACAAAGGTTATGAGGCTGGTATTGGTACAAAACTGAATGCCTCGGAGCGTAGTGCACGTGACTATGAAGGTCATGGTTCACATACTTTATCAACAGCAGGTGGTAACTTTGTTCCAGGAGTTAGTCTATTTGGCTTTGGCAATGGAACTGCAAGTGGTGGATCACCAAAAGCTCGAGTTGCAGCCTATAAGGCGTGTTGGCCAGCTACTACCTTGCTCGATGGTGGATGTTTTGATGCAGATATTTTGGCTGCTTTTGAGGCTGCCATAAGTGACGGCGTTAACGTGATTTCGGTGTCTTTGGGTTCAGATATTTCCTCGGAATATTTTCAAAGCGCTATTTCAATAGGGTCCTTCCATGCAGTTGCCAACGGCATAACAGTAGTAGCTTCTGGAGGAAATTCAGGACCTTTTCCTGGAACTGTATCCAACAATGAACCATGGATGCTCACAATTGCAGCAAGCACAATTGATAGAGACTTCGCTAGTTATGTTACACTTGGCAACAAGAAAATTATCAAGGTATATTGGTTTATTGTAGAACCTTGTCTTTCTTTCCATTCTTGCAGCACTTTGTGCTCCTATGGAACTCTTGATCCTGAGAAAGCAAAGGGAAAAATATTGGTCTGTTTTGGTGGTGGAACTGGCGTTGATCTGGAAGCTATTAGGGTGGGCGTTGTTGGAATGATCTTGGCCTATGACAACACAGGGCTTGAAATTCTAGCCGACCCCCATTTGCTTCCTGTTTCGAATGTTGGCTTTGAGAATGGCAATTACATTTATAATTACATCAGCAGCACCAAGTTTCATGATGTGCTTATGAAATCTTTCAACATCAATTTACTAAAATTTAAAACAAGAGCTAAAACAATAGAAGTTACTTGGCTTAAGAGCTGCTATGCGAGAACACCTTTACAGTGGAATTCGGTGCCTCATCAGCCCTCATGCCATTTTACTTAA 1110 0.4252 MTSQDGAGAWPESKSFSDEGFGPIPKRWRGICQTEDKFHCNRKLIGARYFYKGYEAGIGTKLNASERSARDYEGHGSHTLSTAGGNFVPGVSLFGFGNGTASGGSPKARVAAYKACWPATTLLDGGCFDADILAAFEAAISDGVNVISVSLGSDISSEYFQSAISIGSFHAVANGITVVASGGNSGPFPGTVSNNEPWMLTIAASTIDRDFASYVTLGNKKIIKVYWFIVEPCLSFHSCSTLCSYGTLDPEKAKGKILVCFGGGTGVDLEAIRVGVVGMILAYDNTGLEILADPHLLPVSNVGFENGNYIYNYISSTKFHDVLMKSFNINLLKFKTRAKTIEVTWLKSCYARTPLQWNSVPHQPSCHFT 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01551 369 MobiDBLite consensus disorder prediction 1 21 - -
Pumo4g01551 369 Pfam Subtilase family 65 219 IPR000209 GO:0006508|GO:0008236
Pumo4g01551 369 CDD PA_subtilisin_like 214 322 - -
Pumo4g01551 369 CDD Peptidases_S8_3 8 207 IPR034197 -
Pumo4g01551 369 Gene3D Peptidase S8/S53 domain 8 207 IPR036852 GO:0004252|GO:0006508
Pumo4g01551 369 Gene3D - 208 323 - -
Pumo4g01551 369 ProSiteProfiles Serine proteases, subtilase domain profile. 1 369 - -
Pumo4g01551 369 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 8 321 IPR045051 -
Pumo4g01551 369 SUPERFAMILY Subtilisin-like 30 226 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01551 Pumo-Chr4 19602853 19606261 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01551 8 318 Subtilisin-like Serine Gene Family AT5G59810 53.313 8.42e-104 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01551 - - ccaj:109807044 437.187