Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01550 ATGCCGAGTGTCAACCCACTTTTTATTGATGCTGTGATTTGTGGTATAGGTGCTTGGCCTGAATCCAAGAGTTTTAGTGATGAAGGGTTTGGACCCATCCCAAAACGGTGGCGTGGAATCTGTCAAACAGAAGATAAATTTCACTGCAACAGGAAGCTTATTGGAGCAAGATATTTTTACAAAGGTTATGAGGCTAGTATTGGTAGAAAACTGAATGCCTCGAATTTTAGTGCACGTGACTATGCAGGTCATGGTTCACATACTTTATCAACAGCAGGTGGTAACTTTGTTCCAGGAGTTAGTCTATTTGGCTTTGGCAATGGAACTGCAAGTGGTGGATCACCAAAAGCTCGAGTTGCAGCCTATAAAGCGTTTGCCAACGGCATAACAGTAGTAGCTTCTGGAGGAAATATAGGACCTATTCCTGGAACTGTATCCAACAATGAACCATGGACGCTCACAGTTGCAGCAAGCACAATTGATAGAGACTTTGCTAGTTATGTTACACTTGGTGACAAGAAAATTATCAAGGGAGCTAGTCTTTCAGAGCATCACTTACCATCTAATAAGATGTACCCATTGATTAGTTCAACTGATGCCAAAGCTAATAATGTAACTATTGTGGACGCTGCTTTGTGCTTAAGAGGAACTCTTGATCCTGAGAAAGTAAAGGGAAAAATATTGGTCTGTTTTGCTGCTGGAACTGGCGTTGATCTGGAAGCTATTAGGATAGGCGCTGTTGGAATGATCTTGACCTATGTCAACACAGGGCTTGAAATTCTAGCTGACCCCCAATTGCTTCCTGCTTCGAATGTTGACTTTGAGAATGGCAATTACATTTATAATTACATCAGCAGCACCAAGTAA 867 0.4164 MPSVNPLFIDAVICGIGAWPESKSFSDEGFGPIPKRWRGICQTEDKFHCNRKLIGARYFYKGYEASIGRKLNASNFSARDYAGHGSHTLSTAGGNFVPGVSLFGFGNGTASGGSPKARVAAYKAFANGITVVASGGNIGPIPGTVSNNEPWTLTVAASTIDRDFASYVTLGDKKIIKGASLSEHHLPSNKMYPLISSTDAKANNVTIVDAALCLRGTLDPEKVKGKILVCFAAGTGVDLEAIRIGAVGMILTYVNTGLEILADPQLLPASNVDFENGNYIYNYISSTK 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01550 288 CDD PA_subtilisin_like 167 288 - -
Pumo4g01550 288 FunFam subtilisin-like protease SBT1.5 161 288 - -
Pumo4g01550 288 SUPERFAMILY Subtilisin-like 39 195 IPR036852 GO:0004252|GO:0006508
Pumo4g01550 288 Gene3D Peptidase S8/S53 domain 126 160 IPR036852 GO:0004252|GO:0006508
Pumo4g01550 288 Gene3D Peptidase S8/S53 domain 17 125 IPR036852 GO:0004252|GO:0006508
Pumo4g01550 288 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 124 IPR045051 -
Pumo4g01550 288 Gene3D - 161 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01550 Pumo-Chr4 19585235 19586771 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01550 10 288 Subtilisin-like Serine Gene Family AT2G04160 48.538 1.67e-88 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01550 - - ccaj:109807325 350.517