Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01548 ATGTTGGAAGAGCATCCGAATGTAATATCAGTTTTCTTAAACAAAGAACGGAAATTGCACACAACACGCTCATGGAATTTCCTTGGGTTAGAGAGAAATGGTGTATTTCCACATGCCTCAGTATGGCGAAAGACCAAGGGTGAAGATATCATTATTGGAAATATAGACACAGGTGTTTGGCCTGAATCCAAAAGTTTTAGTGATGAAGGGATGGGACCGATCCCAAAACGGTGGCGTGGAATCTGTCAAACAGAAGATAAATTTCACTGCAACAGGAAGCTTATTGGAGCAAGGTATTATTACAAAGGTTATGAGGCAAGTGTTGGTGAAAAACCGAATGCCTCGGAGCTTAGTGCACGTGACTATGAAGGTCATGGTTCACATACTTTATCAACAGCAGGTGGTAACTTTGTTCCTGGAGTTAGTCTATTTGGCTTTGCCAATGGAACAGCAAGTGGTGGATCACCAAAAGCTCGAGTTGCAGCCTATAAGGCGTGTTGGCCAGATACTACCTTGCTCAGTGGTGGATGCTTTGATGCAGACATTTTGGCTTCTTTTGAGGATGCAATAAGTGACGGTGTTAATGTGATTTCGATGTCTTTGGGTTCAGATGATCCCCCAGAATATTTTCAAAGCAGTGTATCCATAGGGTCCTTCCATGCAGTTGCCAACGGCATAACAGTAGTTGCTTCTGGAGGAAATTCAGGACCTTTTCCTGGAACTGTATCCAATAATGAACCTTGGATGCTCACAGTTGCAGCAAGCACAATTGATAGAGACTTTGTTAGTTATGTTACACTTGGTGACAAGAAAATCCTCAAGGGAGCTAGCCTTTCAAAGTATGAATTACCATCTCGTAAGATGTACCCATTGATCAGTGCTGCTGATGCCAAAACTATACATGCACCTGCTAACGATGCCTCTCTTTGCATGAATAGAACTCTTGATCCTGTGAAGGCGAAGGGGAAAATATTGGTCTGTCTTCGCGGTGTTAATGCTAGAATTGAGAAGGGTGAGGTAGCTGCTAGTGTAGGTGCCGTTGGAATGATTTTGGCTAATGACAAGGACTCAGGGAATGAAATTATATTTGACCGCCATGTGCTTCCTGCTTCACATGTTAACTTTGACAGTGGCAGTTACATATATAATTACATCAACCGCACCAAGTCTCCTGTGGCTTACATTTCTAAAGCGAAAACAGAATTGGGTGTAAAGCCAACTCCATTTGTGGCTTCATTTTCATCAAGGGGCCCCAGTCTTCTTGATCCAGCAATCCTCAAGCCTGATGTCACTGCTCCTGGAGTCGACATCGTTGCTGCTTATACTGAAGCCGTATCTCCCACAAATCAAGCATCTAACGAAGAAATAACGCCTTACATTAATTTGTCCGGCACTTCAATGTCATGTCCTCATGTTGCTGGCCTTGTTGGGCTGCTCAAAGCCCTTCATCCTCATTGGAGCCCAGCTGCTATTAAGTCAGCAATCATTACCTCAGCAACTACAAAAGCTAACACTAGAAAGCCTATCCTGGATTCATCATTAGTGAACAAGGCAACTCCATTTGACTATGGAGCAGGCCACATTCGACCTAATCATGCTGCGGACCCTGGACTTGTATATGACCTAAATACGGCTGATTATTTGAACTTTTTGTGTGGTCGTGGCTACAACAGTTCCCAGCTTAAGTTGTTCTACGGCAAGCCTTACACTTGTCCAAAGTCCTTCAGTTTAGCAGATTTCAATTATCCAGCAATCACAATTCCTCAGTTAGACCCTGGACATTCTCTGAAGGTTACTCGAACTATTACTAATGCTGGGTCCCCAAGAACGTATAGAGTGCACGTCAAGGCACCACCACATGTTGCAGTTTCGGTTAAGCCTAGGAAACTGAGGTTCAAGAAAAAGGGTGAAAAAAAGAAGTTCAGAGTTACATTGACCTTGAAGCCGCAAACTAAGAACACCACTGGTTACGTATTCGGGTGGTTGACGTGGACTGATCACAAGCACCGTGTTAGGAGTCCCATTGCAGTGCAAGCCACCACTCCTCTTCCCTCTGCCGTTGTCTCCGCCGCAACTACTCCCTCCTCTGCAACTCGCCCAGGCTCTGTCACCACCTTTATCGACGCCGCTACCGACCACTTTCGTCATCCTTGGCACCGAAACCCTAGCCTCCAACCTCACCTTGTTTATTTGCCGCCGCGTTCTGCTCTTGTTGCGTCACTTTTCTCGCTGCATTCTACTCTCGTTGTGTCATTTCTCTCTCTGCGTTATACTCTCCTTGCATCACCTCTCTCGCCTTCATCATATCTCTTTCAATTAGGTTCTCTTTCGCTATTCGAAGTGAAGGATGCCAACATGCTAGTATTTGTAACTCCACATCAATTCATGGAAGGAATATGCGAAAGGCTTGCTGGGAAAATAAAGGCAAATGAAGGTCATGGAAGATGTGCAACTCATGTTACCGATGCATATATGATTCCAGATCAAGATATGATTTATGTACTAGTAGGAATAAGCATGGAAGGTAGTGAAACTTCTTGCAGATGGTTGAAGGTATGTGCTTCCATGGTAACAAGTTCTTAG 2583 0.4433 MLEEHPNVISVFLNKERKLHTTRSWNFLGLERNGVFPHASVWRKTKGEDIIIGNIDTGVWPESKSFSDEGMGPIPKRWRGICQTEDKFHCNRKLIGARYYYKGYEASVGEKPNASELSARDYEGHGSHTLSTAGGNFVPGVSLFGFANGTASGGSPKARVAAYKACWPDTTLLSGGCFDADILASFEDAISDGVNVISMSLGSDDPPEYFQSSVSIGSFHAVANGITVVASGGNSGPFPGTVSNNEPWMLTVAASTIDRDFVSYVTLGDKKILKGASLSKYELPSRKMYPLISAADAKTIHAPANDASLCMNRTLDPVKAKGKILVCLRGVNARIEKGEVAASVGAVGMILANDKDSGNEIIFDRHVLPASHVNFDSGSYIYNYINRTKSPVAYISKAKTELGVKPTPFVASFSSRGPSLLDPAILKPDVTAPGVDIVAAYTEAVSPTNQASNEEITPYINLSGTSMSCPHVAGLVGLLKALHPHWSPAAIKSAIITSATTKANTRKPILDSSLVNKATPFDYGAGHIRPNHAADPGLVYDLNTADYLNFLCGRGYNSSQLKLFYGKPYTCPKSFSLADFNYPAITIPQLDPGHSLKVTRTITNAGSPRTYRVHVKAPPHVAVSVKPRKLRFKKKGEKKKFRVTLTLKPQTKNTTGYVFGWLTWTDHKHRVRSPIAVQATTPLPSAVVSAATTPSSATRPGSVTTFIDAATDHFRHPWHRNPSLQPHLVYLPPRSALVASLFSLHSTLVVSFLSLRYTLLASPLSPSSYLFQLGSLSLFEVKDANMLVFVTPHQFMEGICERLAGKIKANEGHGRCATHVTDAYMIPDQDMIYVLVGISMEGSETSCRWLKVCASMVTSS 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01548 860 Pfam Fibronectin type-III domain 579 677 IPR041469 -
Pumo4g01548 860 ProSitePatterns Serine proteases, subtilase family, serine active site. 464 474 IPR023828 -
Pumo4g01548 860 SUPERFAMILY Subtilisin-like 19 538 IPR036852 GO:0004252|GO:0006508
Pumo4g01548 860 CDD Peptidases_S8_3 18 500 IPR034197 -
Pumo4g01548 860 Gene3D Peptidase S8/S53 domain 49 547 IPR036852 GO:0004252|GO:0006508
Pumo4g01548 860 Pfam PA domain 305 379 IPR003137 -
Pumo4g01548 860 Gene3D - 551 680 - -
Pumo4g01548 860 CDD PA_subtilisin_like 264 395 - -
Pumo4g01548 860 Pfam Subtilase family 47 504 IPR000209 GO:0006508|GO:0008236
Pumo4g01548 860 FunFam Subtilisin-like protease SBT1.5 551 680 - -
Pumo4g01548 860 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 677 IPR045051 -
Pumo4g01548 860 FunFam Subtilisin-like protease SBT1.5 49 268 - -
Pumo4g01548 860 ProSiteProfiles Serine proteases, subtilase domain profile. 24 534 - -
Pumo4g01548 860 FunFam subtilisin-like protease SBT1.5 258 402 - -
Pumo4g01548 860 Gene3D - 258 402 - -
Pumo4g01548 860 PRINTS Subtilisin serine protease family (S8) signature 463 479 IPR015500 -
Pumo4g01548 860 PRINTS Subtilisin serine protease family (S8) signature 47 66 IPR015500 -
Pumo4g01548 860 PRINTS Subtilisin serine protease family (S8) signature 121 134 IPR015500 -
Pumo4g01548 860 SUPERFAMILY PA domain 317 388 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01548 Pumo-Chr4 19393349 19400731 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01548 2 681 Subtilisin-like Serine Gene Family AT5G59810 57.771 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01548 - - ccaj:109807044 1023.08