Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01547 ATGAAGATGAAAGTAGAACGGTGCGTTAACATGAATCTGGTTCTGGTGGTGGCGTGGTTGGTCCAGTTGAACATTGTTTTTGGCTTTGCTCACATAACTGGTTTTGGGGAGCAACCACTCTCCAGGATTGCCATCCACAAGGCTGTTGTTTCACTCCACAGTAGCGCTTCCATCACAGTCACCCCTTCTCTTCTCGGCACAAAGGGTGAGGATACCCAATGGGTGACAGTAGATATTGATTACCCTGACCCATCTGCAGATGATTGGGTTGGAGTTTTCTCTCCTGCAAAGTTCAATGCATCAACCTGTCCACCTGTGAATGATCCAAAAGAAGTGACTCCATACATATGCTCAGCCCCAATCAAGTACAAGTTTATGAATTACTCCAACTCACACTATACGAAGACAGGAAAAGCTTCTTTGAAGTTCCAGTTGATCAATCAACGAGCAGATTTCTCCTTTGCACTATTTTCAGGCGGACTGTTAAATCCTAAGCTTGTGGCAGTTTCCAATTTCATATCATTTGCCAATCCTAAAGTGCCTCTATATCCACGACTTGCTCAGGGGAAGTCTTGGGATGAAATGACAGTTACCTGGACTAGTGGATATGACATAAATGAAGCTATACCGTTTGTTGAGTGGGGTCCTAAGGGTAAAACGCAAGTGCAATCTCCTGCAGGAACATTGACATTTGGTCGTAACAGCATGTGTGGTTCACCTGCACGAACTGTTGGTTGGCGTGACCCTGGTTTCATACACACAAGTTTTCTCAAAAACCTTTGGCCAAATTTAGTGTATACATATCGATTAGGGCATCTATTGTCTGACTGGTTCTTATATTTGGAGCAAGAAATATTCATTCAAGTCATCACCTTATCCTGGACAGGACTCACTGCAACGTGTCATCATATTTGGTGA 918 0.4368 MKMKVERCVNMNLVLVVAWLVQLNIVFGFAHITGFGEQPLSRIAIHKAVVSLHSSASITVTPSLLGTKGEDTQWVTVDIDYPDPSADDWVGVFSPAKFNASTCPPVNDPKEVTPYICSAPIKYKFMNYSNSHYTKTGKASLKFQLINQRADFSFALFSGGLLNPKLVAVSNFISFANPKVPLYPRLAQGKSWDEMTVTWTSGYDINEAIPFVEWGPKGKTQVQSPAGTLTFGRNSMCGSPARTVGWRDPGFIHTSFLKNLWPNLVYTYRLGHLLSDWFLYLEQEIFIQVITLSWTGLTATCHHIW 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01547 305 Gene3D - 181 281 - -
Pumo4g01547 305 PANTHER PURPLE ACID PHOSPHATASE-RELATED 25 272 - -
Pumo4g01547 305 Pfam Fn3-like domain from Purple Acid Phosphatase 58 177 IPR040974 -
Pumo4g01547 305 SUPERFAMILY Purple acid phosphatase, N-terminal domain 158 273 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01547 Pumo-Chr4 19370448 19373494 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01547 49 277 Miscellaneous Gene Families AT1G13900 29.600 6.89e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01547 K22390 - gmx:100814531 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01547 4 19370448 19373494 Pumo6g02878 6 68795250 68803774 ECH
Pumo4g01547 4 19370448 19373494 Pumo4g01547 4 19370448 19373494 ECH