Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01545 ATGGCCACCACCACCACCACCAGTCTTGGCGGCGGCGCCGGCGGAGACGACCGCGTCCTCGCGACGGCTCAGCAGATCGTGAAGAGTCTCAGAGCCGCGAAAGAGGATCGCGAAGACATGCTTATGATCTTCTCCGCCTTCGACAACCGTCTCTCCGGTATCTCCGACCTCATCAACGGCGACGATTCGAAGTCTTCTGATGAAGAAGAACTCGACCGCTTCGAAGCCGCGGAGAAAGTGATTCTCGCCGACGCGTCCCTCTCCGGCGAGCCTTCGCGTCAATCCACGTCGCTCTTCAACCCTCCGAACAATCCCGCGGAGTACTTCTCCGCCGTGGACGAGATCATCCACTGGATGGAGCAGTTCTCGATCGCGCCGCCGTCAACCGCCGCCGGACGCACCGGCCAGATCATCGCGGACCGCGCGGAGAACGCGATTCAGCTCGCGATGTCGCGGCTGGAGGAGGAGCTGCGGCACGTGCTGATTTGCAACACGATCCCTTTCGACGCCGTGAGCCGCTACGGCTCGATCAGGAGGGTTTCGCTCTCGTTCGGCTCGCACGACGGCCCAATCGACGACTCCACCCTAGAGAGCTTTAGCGAGGTCGGCTCGAGCCGCTACCACGAGCGTGGCGCGAGCCTCGGCGACGATTTGTTCGTCGATTTGGTGCGTCCCGAGGCGGTTCCGGACCTCAGAGAAATCATCGATCGCATGGTTAGGTCTGGTTATGAGAGAGAGTGTCTTCAGGTTTATAGTAGCGTCCGTCGTGACGCTTTGGATGAGTGTTTGGTTATTCTCGGCGTTGATAGGTTGAGTATTGAAGAGGTTCAGAAGGTTGAGTGGAAGAGTTTGGATGAGAAGATGAAGAATTGGGTTCAGGCTGTTAAGGTTGTTGTTAGGGTTCTGTTGAGTGGTGAGAAGAGGCTGTGTGATGGTTTGTTTGGGGATTTGGATGACTTGAAGGAGATTTGTTTCAATGAGACTGCTAAGGGGTGTGTGATGCAGTTGCTGAATTTTGGCGAGGCTATTGCGATTTGTAAGCGGTCGCCGGAGAAGTTGTTTAAGATTTTGGATATGTATGAGGCTTTGAGGGATGCTATGCCTGATTTGCAGGCCATGGTTTCTGATGAGTTTGTGATTGGTGAGGCCAATGGAGTGCTGAGTGGGCTTGGTGAGGCTGCCAAAGGGACTTTTGCTGAGTTTGAGAATTGTATTAGGAACGAGAATTCCAAGAAGCCGGTCATAACTGGGGATGTTCATCCCTTGCCTCGTTATGTCATGAATTACCTCAAGTTGCTTGTTGATTATGGTGACTCTATGGATTCACTTCTGGAGATTAGCGAGGAGGATCTCTATCGGTTTAAATATGATCTTGGTGGTGATGGTTCGCAGTTAGAGGCTATGTCACCCCTGGGACGGCGGATTCTGTTGCTCATGTCTGAGCTTGAGTACAATCTTGAGGAGAAGTCGAAGCTTTATGAAGATGCTGCAATGCAGCAGGTGTTTTTGATGAACAATCTGTATTACCTTGTGCGGAAAGTGAAGGACTCCGACCTTGGGAAGGTCTTGGGTGATAATTGGATTAGGAAACGCCGAGGTCAGATACGCCAGTATGCTACAGGGTATCTCAGAGCCTCTTGGAGCAAGGCCTTATCTTGTTTGAAGGATGAAGGGATTGGAGGGAGCTCTAATAATGCGTCAAAGATGGCCTTGAAGGAGAGGTTCAAGAGTTTCAATGCTTGTTTTGAAGAAATTTACAGGGTTCAGACAGCTTGGAAGGTACCAGATGATCAGCTTCGGGAGGAGATGCGGATATCTATATCAGAGAAGGTGATTCCTGCATACCGCTCGTTTTGGGGAAGGTTTAGGGGTCAGTTAGAGGGAAGGCATGCAGGGAAGTACATTAAGTATACACCAGAGGATCTAGAGACCTATCTATTAGATTTATTCGAAGGATCCCCAGCTGTATTGCATCACATAAGGAGGAAAAGTACATAG 1998 0.5145 MATTTTTSLGGGAGGDDRVLATAQQIVKSLRAAKEDREDMLMIFSAFDNRLSGISDLINGDDSKSSDEEELDRFEAAEKVILADASLSGEPSRQSTSLFNPPNNPAEYFSAVDEIIHWMEQFSIAPPSTAAGRTGQIIADRAENAIQLAMSRLEEELRHVLICNTIPFDAVSRYGSIRRVSLSFGSHDGPIDDSTLESFSEVGSSRYHERGASLGDDLFVDLVRPEAVPDLREIIDRMVRSGYERECLQVYSSVRRDALDECLVILGVDRLSIEEVQKVEWKSLDEKMKNWVQAVKVVVRVLLSGEKRLCDGLFGDLDDLKEICFNETAKGCVMQLLNFGEAIAICKRSPEKLFKILDMYEALRDAMPDLQAMVSDEFVIGEANGVLSGLGEAAKGTFAEFENCIRNENSKKPVITGDVHPLPRYVMNYLKLLVDYGDSMDSLLEISEEDLYRFKYDLGGDGSQLEAMSPLGRRILLLMSELEYNLEEKSKLYEDAAMQQVFLMNNLYYLVRKVKDSDLGKVLGDNWIRKRRGQIRQYATGYLRASWSKALSCLKDEGIGGSSNNASKMALKERFKSFNACFEEIYRVQTAWKVPDDQLREEMRISISEKVIPAYRSFWGRFRGQLEGRHAGKYIKYTPEDLETYLLDLFEGSPAVLHHIRRKST 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01545 665 Coils Coil 139 159 - -
Pumo4g01545 665 Gene3D Exocyst complex component Exo70 92 657 - -
Pumo4g01545 665 SUPERFAMILY Cullin repeat-like 102 651 IPR016159 -
Pumo4g01545 665 PANTHER EXOCYST COMPLEX PROTEIN EXO70 68 652 IPR004140 GO:0000145|GO:0006887
Pumo4g01545 665 Pfam Exo70 exocyst complex subunit 289 647 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01545 Pumo-Chr4 19342082 19345938 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01545 17 664 EXO70 exocyst subunit family AT5G50380 59.205 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01545 K07195 - gmx:100818693 1208.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01545 4 19342082 19345938 Pumo4g01545 4 19342082 19345938 ECH
Pumo10g01830 10 24097298 24102176 Pumo4g01545 4 19342082 19345938 PCT