Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01481 ATGGCAATGATCTCTTTCATAGTCTTTGTTTTCCTTACACTCTTGTTCACCTTGTCATTGATTAAACAGTTGAGAAAGCCTACTGCAGAAAAGAGAACACTACCTCCTGGGCCAAGGAAACTACCCTTCATTGGCAACCTCCACCAACTTGGTGCGTTGCCCCATCGATCCCTTCAACATCTTTCAAATAATCATGGACCCCTCATGTTCTTGCAGTTGGGTTCAATACCCACCTTGGTAGTTTCCTCTGCTGAGATGGCCAGAGAGATTTTCAAAAACCATGACTCGGTTTTCTCTGGCAGGCCTTCATTACACGCTGCAAACCGTTTAGGATACGGTTCAACAGTGAGTTTTGCACCGTACGGTGAATACTGGAGAGAAATGAGGAAGATCATGATCCTGGAGCTGTTGAGTCCGAGGAGGGTTCAATCGTTTGAAGCTGTGAGATTTGAAGAGGTCAAACTTTTGCTTCAGTCCATAGCTCTTTCTCATGCTCCTGTTAATTTAAGTGAACTTACCCTTTCGTTGACCAACAACGTTGTTTGTCGGATTGCTCTCGGCAAAAGGGACAGGACCGGGGCAGATAAGGCAAATAAGCTTTCTGAAATGCTTAAAGAAACACAGGCAATGCTGGGAGGATTCTTTCCGGTTGACTTTTTTCCATGGTTGGGGTGGCTCAACAAGTTTAGTGGCCTTGAAAATAGGCTAGAGAAGAATTTCAGAGAAATGGATAGCTTTTATGACCAAGTGATTAAGGAGCATATTAATGACTCTTCTGAGAGGTCAGGAGTAGAGAATGAAGATGTTGTCGATGTACTTCTTCAAGTTCAGAAGGATTCAAATCAAGCAATTGCCATCACTGATGATCAAATCAAGGGTGTACTCGTGGACATCTTTGTAGCGGGAACCGACACTGCTTCAGCCACAATGATATGGATAATGTCTGAGCTTATTAGGAATCCAAAGGCAATGAAAAGAGCACAAGAAGAGGTAAGAGAACTTGTAAAAGGAAAAGAGATGGTAGAGGAGATTGATCTCTCAAGGTTCTTGTACCTCAAGTCAGTTGTGAAGGAGGCACTAAGACTCCATCCCCCGGCTCCATTACTTATCCCAAGAGAGACTATAGAGAGTTGCACGATCCAAGGGTTTGAAATCCCAGCGAAAACAAGGGTGCTTGTTAATGCAAAATCAATAGCAATGGATCCAACTTGTTGGGAGAATCCAAATGAGTTCTTACCAGAGAGGTTCCTGGATAGTCCAATAGATTTTAAAGGACAACACTATGAGATGTTGCCATTTGGGGTAGGTCGAAGGGGTTGCCCTGGAATGAACTTTGCCATGCCACTTGTTGAGTTAGCACTTGCAAATCTTCTGTTTCGTTTTGACTGGGAACTGCCTCTTGGACTTGGAATACAAGACTTGGATATGGAAGAAGCAGTTGGTATAACCATACACAAGAAAGCTCATCTTTGGCTGAAAGCCACTCCCTTTTGCGAGTAG 1500 0.436 MAMISFIVFVFLTLLFTLSLIKQLRKPTAEKRTLPPGPRKLPFIGNLHQLGALPHRSLQHLSNNHGPLMFLQLGSIPTLVVSSAEMAREIFKNHDSVFSGRPSLHAANRLGYGSTVSFAPYGEYWREMRKIMILELLSPRRVQSFEAVRFEEVKLLLQSIALSHAPVNLSELTLSLTNNVVCRIALGKRDRTGADKANKLSEMLKETQAMLGGFFPVDFFPWLGWLNKFSGLENRLEKNFREMDSFYDQVIKEHINDSSERSGVENEDVVDVLLQVQKDSNQAIAITDDQIKGVLVDIFVAGTDTASATMIWIMSELIRNPKAMKRAQEEVRELVKGKEMVEEIDLSRFLYLKSVVKEALRLHPPAPLLIPRETIESCTIQGFEIPAKTRVLVNAKSIAMDPTCWENPNEFLPERFLDSPIDFKGQHYEMLPFGVGRRGCPGMNFAMPLVELALANLLFRFDWELPLGLGIQDLDMEEAVGITIHKKAHLWLKATPFCE 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01481 499 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01481 499 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01481 499 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01481 499 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01481 499 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01481 499 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01481 499 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01481 499 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01481 499 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01481 499 FunFam Cytochrome P450 99A2 24 495 - -
Pumo4g01481 499 Coils Coil 324 344 - -
Pumo4g01481 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Pumo4g01481 499 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01481 499 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01481 499 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01481 499 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01481 499 Gene3D Cytochrome P450 24 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01481 499 PANTHER CYTOCHROME P450 71B11-RELATED 15 494 - -
Pumo4g01481 499 SUPERFAMILY Cytochrome P450 35 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01481 499 CDD CYP71-like 65 490 - -
Pumo4g01481 499 Pfam Cytochrome P450 35 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01481 Pumo-Chr4 18763828 18766232 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01481 11 499 Cytochrome P450 AT3G26300 42.600 6.75e-143 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01481 K20617 - gmx:100806157 876.7