Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01478 ATGGTGTTTTTAGGACTTGGCTGGAGCTATCCATGTGATATATGGAGTGTGGGATGTATATTGGTCGAGTTATGCACGGGTGAAGCTTTGTTTCAGACTCATGAAAATTTAGAGCATCTTGCAATGATGGAAAGGGTACTTGGTCCATTACCACAGCACATGTTGAAGAGAGTCGACCGACATGCTGAGAAGTATGTTAGAAGGGGTAGACTAGACTGGCCTGAGGGAGCCGCCTCAAGGGAGAGTATCAAAGCTGTAATGAAGCTTCCTAGGCTACAGAACCTTATAATGCAGCATGCAGATCATTCAGCTGGCTATCTCATACATCTCTTGCAGGGGTTACTTAGATACGACCCTTCTGAAAGACTTACAGCCAAGGAAGCTCTTAGACATTCCTTCTTTATGAGAGATCACTTTATGAGATGA 426 0.4413 MVFLGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKAVMKLPRLQNLIMQHADHSAGYLIHLLQGLLRYDPSERLTAKEALRHSFFMRDHFMR 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01478 141 ProSiteProfiles Protein kinase domain profile. 1 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01478 141 SUPERFAMILY Protein kinase-like (PK-like) 2 138 IPR011009 -
Pumo4g01478 141 Pfam Protein kinase domain 9 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01478 141 Gene3D Transferase(Phosphotransferase) domain 1 2 134 - -
Pumo4g01478 141 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 2 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01478 Pumo-Chr4 18744138 18744827 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01478 7 133 MAP Kinase Gene Family AT1G10210 30.769 7.97e-11 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Pumo4g01478 Pkinase 5.1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01478 K08287 - gmx:100804452 271.552