Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01476 ATGGCTCTCAAACAATGGCTGTATGAGCAAATGAAAGAGATGTCCTATTCTACCTTTTATCTATCTCTTTTCTTCTTTATCAGCGTCCTCTACGTGTTTAAGCTCACAAGAAAAACCAAATCCAAAACCAATCTGAATTTGCCCCCATCACCACCAAAACTACCACTCATAGGAAATCTTCATCAGTTAGGCTCACTGCCACACCGGTCTCTTCGAGACCTCTCACTCAAATATGGTGACATCATGTTGTTGCAGCTGGGGCAGATGCAGAATCCAACTGTGGTGGTTTCATCCGTAGATGTTGCCATGGAAATCATGAAAACGCATGACTTGGCCTTTTCAAACCGACCCCAAAACACTGCTGCAAAAATCTTACTCTATGGAGGAATTGACATTGCTTTCGGACTCTATGGGGAAAGCTGGAGTCAGAAAAAGAAAATATGCGTCCATGAACTTCTGAGCCCGAAAATGGTTCAATCATTTCATCAAGTCAGAGAAGAAGAAGTCGCCAAATTGGTGAATAAGCTACGTGAAGTGAGTTCCAGCGAAGAGTGCTACGTGAATATAAAGGAGATGCTTATGTCTACATCAAACAACATCGTATGTGAATGTGCTCTCGGACGGAAATACACGGGTGATGGTTACAGCAGGGTCAAAGAGTTAGCAAGGACTGTTATGGTTCAGCTTGCAGGTTTCACTGTGAGAGATTACTTCCCTATGTTGGGTTGGGTTGATGTTCTCACTGGAAAAATTCAGGAGTTCAAGACCACTTTTCACGCATTGGATGCTTTATTTGATCAAGCAATTGCGGAGCATTTGACAGTAAAGACCGAAGGTGATGACTACTCCAAAAAGAAAGACTTTGTGGATATCCTCCTCCAACTTCAAGAGAATGACATGCTTAATTTTGAGTTCACCAAAAATGACCTCAAAGCACTTATAATGGATATGTTTGTTGGAGGAACTGACCCAGCTGCAGTAACATTAGAATGGGCTATTTCAGAGCTTGTGAGAAACCCAACCATAATGAAGAAAGTTCAGGAAGAAGTGAGAAAAGTTGTAGGGCATAAAGCAAATGTAGAAGAAAATGACGTCACTCAAATGCATTACCTAAACTGTATAGTCAAAGAAACTCTAAGATTACATCCACCAGCTACTCTGTTGGCTCCACGGGAAATAATGTCTAGTGTTAAATTGAAAGGATACGACATTCCTGCAAAATCAATGGTATATATTAATGCATGGGCAATTCACAGGGATCCTGTATTTTGGGAAAATCCTGAAGAGTTCCTGCCAGAGAGATTTGAAAACAGTGAAATTGATTTTAAAGGTCAGCATTTTGAGTTTATTCCATTCGGTTTTGGGAGAAGAAGATGTCCTGGAATGAATTTTGGAATTGCTTCTGTTGAGTATGTTCTTGCTAGCCTTCTTTATTGGTTCGATTGGAAGCTTCCTGAATTTGATACACATAAACAAGACATTGATATGAGTGAGATGTCCGGACTCGTTGTCTCAAAGAAAACACCCCTGTTTCTTAAACCAATAGCTTATTCATTTTCAGAGGTTAAATTAATGTGCAAGTCTATGAACTATGACAATTTTTAA 1605 0.4 MALKQWLYEQMKEMSYSTFYLSLFFFISVLYVFKLTRKTKSKTNLNLPPSPPKLPLIGNLHQLGSLPHRSLRDLSLKYGDIMLLQLGQMQNPTVVVSSVDVAMEIMKTHDLAFSNRPQNTAAKILLYGGIDIAFGLYGESWSQKKKICVHELLSPKMVQSFHQVREEEVAKLVNKLREVSSSEECYVNIKEMLMSTSNNIVCECALGRKYTGDGYSRVKELARTVMVQLAGFTVRDYFPMLGWVDVLTGKIQEFKTTFHALDALFDQAIAEHLTVKTEGDDYSKKKDFVDILLQLQENDMLNFEFTKNDLKALIMDMFVGGTDPAAVTLEWAISELVRNPTIMKKVQEEVRKVVGHKANVEENDVTQMHYLNCIVKETLRLHPPATLLAPREIMSSVKLKGYDIPAKSMVYINAWAIHRDPVFWENPEEFLPERFENSEIDFKGQHFEFIPFGFGRRRCPGMNFGIASVEYVLASLLYWFDWKLPEFDTHKQDIDMSEMSGLVVSKKTPLFLKPIAYSFSEVKLMCKSMNYDNF 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01476 534 Gene3D Cytochrome P450 32 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01476 534 CDD CYP71-like 77 510 - -
Pumo4g01476 534 Pfam Cytochrome P450 48 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01476 534 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01476 534 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01476 534 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01476 534 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01476 534 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01476 534 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01476 534 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01476 534 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01476 534 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01476 534 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01476 534 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01476 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Pumo4g01476 534 PANTHER CYTOCHROME P450 71B11-RELATED 30 514 - -
Pumo4g01476 534 SUPERFAMILY Cytochrome P450 48 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01476 534 FunFam Cytochrome P450 83B1 34 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01476 Pumo-Chr4 18679964 18682727 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01476 48 517 Cytochrome P450 AT3G26330 46.105 3.87e-146 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01476 K20617 - gmx:100803384 852.432