Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01474 ATGGCTCTCAAACAATGGCTGTATGAGCAAATGAAAGAAATGTTCTTTTCAACCTTTTATCTATCCCTTTTCTTCTTTATCAGCGTCCTGTACTTGTTTAAGCTCACAAGAAAAAGATCCAAAACCAATCTGAATTTGCCTCCATCACCACCAAAACTACCACTCATAGGCAATCTTCATCAGTTTGGCACACTGCCACACCGGTCTCTTCGAGACCTCTCACTCAAATATGGTGACATTATTTTGTTGCAGTTGGGGCAAATGCAGAATCCAACTTTGGTGGTTTCATCCGTAGATGTGGCCATGGAAATCATGAAAACACATGACATGGCCTTTTCGAACCGACCTCAAAACACTGCTGCAAAAATCTTGCTCTATGGAGGTATTAACATTGCATTTGGACTCTATGGGGAAAGCTGGAGACACAAAAGAAAAATATGTGTCCTTGAATTTCTGAGCATGAAAAGGGTTCAATCATTTCATCAAATCAGAGAAGAAGAAGTTGCCAAATTGGTGAATAAGCTACGTGAAGTGAGCTCCAGTGATGAGTGCTACGTGAATCTAAGCGAGATGCTTATGTCAACATCGAACGACGTCGTGTGTAAATGTGCTCTCGGACGGAAATACACAGGTGATGGTTATAGCAGGGTCAAGGAGTTAGCAAGGGATGTCATGGTTCAGCTTACAGCTTTCACTGTGAGAGATTACTTCCCTCTGTTGGGTTGGGTTGATGTTCTCACTGGAAAAATTCAGGAATATAAGGCCACTTCTCGTGCATTGGATGCTTTATTTGATCAAATAATTGCGGAGCATTTGACAGAAAAGATGGAAGGGGAGCACTCCAAAAAGAAAGACTTTGTGGATATCCTTCTCCAACTTCAAGAGAATAACATGCTTAACTTTGAGCTCACCCGAAATGACCTCAAAGCACTTCTACTGGATATGTTCGTTGGAGGAACTGACACATCTGCAGTAACATTAGAATGGGCTCTTTCAGAGCTTGTGAGAAACCCAATCATAATGAAGAAAGTACAGGAAGAAGTGAGAAAAATTGTAGGACATAAATCAAATGTAGAAGAAAATGACATCAATCAAATGCATTACCTGAAGTGCGTGGTCAAAGAAACTCTAAGGTTACACCCACCTACAACAATTTTGGTTCCACGGGAAACAATATCTAGTGTTAAACTGAAAGGATACGATATTCCTGCAAAAACAACGGTATTTATCAATCTATGGGCAATTCAAAGGGATCCTGCATTTTGGGAAAGTCCCGAAAAGTTCCTTCCAGAGAGATTTGAAAATAGTCAAGTTGATTTTAAAGGTCAGCATTTTCAATATATTCCATTTGGTTTTGGGAGAAGAGGATGTCCTGGAATGAATTTTGGAGTTGCTTCTGTTGAGTATGTTCTTGCCAACCTTCTTTATTGGTTCGATTGGAAGCTACCTGAATCTGATACACTTAAACAAGACATAGATATGAGCGAGATGTTCGGAATGGTTGTCTCAAAGAAAACACCACTTTATCTTAAACCAGTAACTTTTTCATCTTTATCTGAGTTCTAG 1566 0.3978 MALKQWLYEQMKEMFFSTFYLSLFFFISVLYLFKLTRKRSKTNLNLPPSPPKLPLIGNLHQFGTLPHRSLRDLSLKYGDIILLQLGQMQNPTLVVSSVDVAMEIMKTHDMAFSNRPQNTAAKILLYGGINIAFGLYGESWRHKRKICVLEFLSMKRVQSFHQIREEEVAKLVNKLREVSSSDECYVNLSEMLMSTSNDVVCKCALGRKYTGDGYSRVKELARDVMVQLTAFTVRDYFPLLGWVDVLTGKIQEYKATSRALDALFDQIIAEHLTEKMEGEHSKKKDFVDILLQLQENNMLNFELTRNDLKALLLDMFVGGTDTSAVTLEWALSELVRNPIIMKKVQEEVRKIVGHKSNVEENDINQMHYLKCVVKETLRLHPPTTILVPRETISSVKLKGYDIPAKTTVFINLWAIQRDPAFWESPEKFLPERFENSQVDFKGQHFQYIPFGFGRRGCPGMNFGVASVEYVLANLLYWFDWKLPESDTLKQDIDMSEMFGMVVSKKTPLYLKPVTFSSLSEF 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01474 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Pumo4g01474 521 Gene3D Cytochrome P450 31 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01474 521 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01474 521 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01474 521 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01474 521 FunFam Cytochrome P450 83B1 34 511 - -
Pumo4g01474 521 SUPERFAMILY Cytochrome P450 47 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01474 521 Pfam Cytochrome P450 47 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01474 521 CDD CYP71-like 76 508 - -
Pumo4g01474 521 PANTHER CYTOCHROME P450 71B11-RELATED 28 513 - -
Pumo4g01474 521 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01474 521 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01474 521 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01474 521 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01474 521 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01474 521 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01474 521 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01474 521 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01474 Pumo-Chr4 18605708 18625104 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01474 30 515 Cytochrome P450 AT3G26320 45.418 7.16e-150 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01474 K20617 - gmx:100803384 898.271