Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01473 ATGGCTCTTCAATCAATTGAAGGGCGACAACCATCTTCAGCAAATTCAGCCATCTACGTATCCGTGCTTTGCGTGTTGATCGGCGTCGTGTTTAAGATCACAAGAAGAAGCAAATCCAAATCCAATTCTTCACCACCGTCCCCACCAAAGCTACCCTTTATCGGAAATCTTCATCAGCTAGGCGCGTTGCCACACCGTTCCTTCCAAGCCCTCTCAAACAAGTATGGCCCTCTCATGTTGCTGCAGCTCGGCCAAGTCCCAACACTCATCGTTTCATCTGCGGACGTGGCCAGAGAAATATTCAAAACCCACTACGACGTCGTTTTCTCGAACCGGCCCAAGACCACCGCTGCCGGAATCTTTCTCTATGGCTACAAGGACGTGGCTTTCACCCCCTACGGCGACGAGTGGAGACAGAAAAGGAAGGTCTGTGTTCTTGAGCTTGTAAGCATGAAGAGTGTCCGATCGTTTCAGTTCATCATAGTTGAAGAAGTAGCAGAAATGATCGGTGTGATACGCGAAGTGTGTGCGAGTAAGAAGTCCTCTGTGAATCTGAGTGAGTTGTTGATTGCACTCACGAACAACATAATGTCTAGGTGTGTTCTTGGGCAAAAGTATGACACACCCGATGGTAGTAGAAGCTTTGGAGAGCTTGGAAGGAAGTTGTTGAATCAGTTCACGGCTTTCTGTGTGGGAGATTTCTTCCCTTCGTTGGGTTGGGTTGATGTTCTAACGGGCCAAATTCCAAAGTTTAAGGCCACTCTTAGTTCGTTAGATAGTTTCTTTGATCAGGTAATTGCAGAACATAAAACAAAGATAAAGAGGAGGGAAGATGACCAATCCGATAAGAAAGACTTCGTGGATATACTCCTTCAACTTGAAGAAGCTGGTACGCTCGGCTTTGAGCTCACCCAAGATAACCTCAAAGCAATGCTAGTGGACATGTTTATAGGGGCAAGTGACACAACTTCAACAACTTTGGAATGGACTATGGCTGAGCTCATGAGACATCCAAATACCATGGAAAAGGTCCAGGAAGAGATGAGAAGAGTGGTCGGGTATAAAGCTGATGTTGATGAAAATGATGTGAAACAAATGAATTACTTGAAATGTGTAGTAAAAGAAACTTTGAGGCTACATCCACCTGCTCCTCTTTTGCTTCCTCGAGAAAATACCTCTGCTGTGAAACTAAGAGGGTACGAAATTCCAGCCAAGACAAGGCTAATGTTGAACGCGTGGGCAATCCAGAGGGACCCTGAATTTTGGGACAGACCGGATGAGTTCCTTCCAGAAAGATTCGAAAACAGCCACGTAGATTTCAAAGGACAAGATTTGGAGTTTATTCCGTTTGGTGCTGGAAGAAAAGGATGCCCTGGAATTACATTTGGGGTCACTACAGCTGAGTATGCGCTTGCTAATCTTCTTTATCGGTTCGATTGGAAGCTTCCTAAAACTGATTCACCAATGCAAGGTATAGACATGAGTGAGAGAAATGGGATCACTGTCAACAAGAAGGTTCCACTTCTCCTTCAACCAATACCATTCTCTTTAGGAATTGGATCTAAACCTTGA 1572 0.4504 MALQSIEGRQPSSANSAIYVSVLCVLIGVVFKITRRSKSKSNSSPPSPPKLPFIGNLHQLGALPHRSFQALSNKYGPLMLLQLGQVPTLIVSSADVAREIFKTHYDVVFSNRPKTTAAGIFLYGYKDVAFTPYGDEWRQKRKVCVLELVSMKSVRSFQFIIVEEVAEMIGVIREVCASKKSSVNLSELLIALTNNIMSRCVLGQKYDTPDGSRSFGELGRKLLNQFTAFCVGDFFPSLGWVDVLTGQIPKFKATLSSLDSFFDQVIAEHKTKIKRREDDQSDKKDFVDILLQLEEAGTLGFELTQDNLKAMLVDMFIGASDTTSTTLEWTMAELMRHPNTMEKVQEEMRRVVGYKADVDENDVKQMNYLKCVVKETLRLHPPAPLLLPRENTSAVKLRGYEIPAKTRLMLNAWAIQRDPEFWDRPDEFLPERFENSHVDFKGQDLEFIPFGAGRKGCPGITFGVTTAEYALANLLYRFDWKLPKTDSPMQGIDMSERNGITVNKKVPLLLQPIPFSLGIGSKP 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01473 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Pumo4g01473 523 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01473 523 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01473 523 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01473 523 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01473 523 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01473 523 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01473 523 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01473 523 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01473 523 PANTHER CYTOCHROME P450 71B11-RELATED 27 513 - -
Pumo4g01473 523 FunFam Cytochrome P450 83B1 32 511 - -
Pumo4g01473 523 CDD CYP71-like 74 508 - -
Pumo4g01473 523 SUPERFAMILY Cytochrome P450 45 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01473 523 Pfam Cytochrome P450 45 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01473 523 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01473 523 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01473 523 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01473 523 Gene3D Cytochrome P450 29 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01473 Pumo-Chr4 18601540 18603574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01473 35 508 Cytochrome P450 AT3G48310 45.912 2.81e-152 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01473 K20617 - cave:132175480 618.231