Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01464 ATGGCCAACCCTGCCATCAAGCGCGGCGAAAACCAATGGGTTGATAAAATTTACGACCTTATGGATGCTGTCGATAACTACATTCCCATTCCTCAGCGCCAAACTGATCTTCCCTTTTTGTTGGCCATTGAGGATGTTTTCACCATCACCGGTCGTGGAACCGTCGCCACTGGAAGGGTTGAGAGAGGTACCATTAAGGTTGGAGAGACTGTTGATATTGTTGGTGTTAAGGAAACTAGGAACACCACTGTGACTGGGGTGGAAATGTTTCAGAAGATTCTGGATGAGGCTTTGGCTGGGGACAATGTGGGGTTGTTGCTTAGGGGTATTCAGAAGACTGATATTCAGAGAGGGATGGTTTTGGCTAAGCCTGGAACCATTACCCCTCACACCAAGTTTTCTGCAATTGTGTATGTTTTGAAGAAGGAAGAGGGTGGCAGGCACTCTCCCTTCTTCGCCGGGTACCGGCCTCAGTTCTACATGAGGACTACTGATGTTACTGGCAAGGTAACTGCCATTATGAATGACAAGGATGAGGAGTCGAAGATGGTTATGCCGGGTGACCGTGTTAAGATGGTTGTTGAACTCATTGTTCCTGTGGCTTGTGAACAAGGAATGAGGTTTGCTATTAGAGAAGGAGGCAAAACTGTTGGAGCTGGTGTTATCCAATCGATCATTGAGTAA 684 0.4708 MANPAIKRGENQWVDKIYDLMDAVDNYIPIPQRQTDLPFLLAIEDVFTITGRGTVATGRVERGTIKVGETVDIVGVKETRNTTVTGVEMFQKILDEALAGDNVGLLLRGIQKTDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTAIMNDKDEESKMVMPGDRVKMVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01464 227 CDD EFTU_II 39 125 IPR033720 -
Pumo4g01464 227 Gene3D Translation factors 166 226 - -
Pumo4g01464 227 FunFam Elongation factor Tu 166 226 - -
Pumo4g01464 227 SUPERFAMILY Translation proteins 33 129 IPR009000 -
Pumo4g01464 227 Gene3D Translation factors 34 162 - -
Pumo4g01464 227 CDD EFTU_III 128 222 - -
Pumo4g01464 227 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 126 226 IPR009001 -
Pumo4g01464 227 PANTHER ELONGATION FACTOR TU-RELATED 11 226 - -
Pumo4g01464 227 Pfam Elongation factor Tu C-terminal domain 126 225 IPR004160 -
Pumo4g01464 227 FunFam Elongation factor Tu 34 162 - -
Pumo4g01464 227 Pfam Elongation factor Tu domain 2 53 121 IPR004161 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01464 Pumo-Chr4 18544409 18545092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01464 20 225 Eukaryotic Initiation Factors Gene Family AT5G60390 31.532 5.44e-18 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01464 K02358 - gmx:100791320 438.728