Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01455 ATGATGTCTCATTCCAAAACCCCCGTCGCCGGCGAAACTAAATTTTCCGGCATGGCGTTCCTGATTCTCCTCCACCTCTCAATTTTCATGACACCCGCACTTTCCCTTGACTTCCTATTCAACTCCTTCGCCGGCGTCACCAACCTCACTCTCGTCAAAGACGCCCGCGTCGACGCCTCCGTCATCCGCATGAACAACGACTCCAACCAATACTCTTACGGCCGCGCCTTCTACCCCATGAAAATCCCCATGAGAAAAAACTCCTCCAATTCTTCTTCCGTTTCTTCGTTCTCCACCTCTTTTGTCTTCTCTATCTTGCCTCAGATCTCTACCAGCCCCGGCTTCGGCCTCGCCTTCGTCCTCTGCAACACCACCGACCCTCCCGGCGCCCTCGCCAGCCAGTACTTTGGCTTATTCACCAACGCAACCTCCCCCTCCGTTTTCCCCCTCGTCGCCGTCGAATTCGACACCGGCCGGAACCCCGAGTTCAACGACATCGACGACAACCACCTCGGAATCGACCTCAACAACATCGAATCCATAAACGCAACCACCGCCGGCTACTACAACTCCTCCGGCGCCTTCGTCCCGGTGCGCATGCGCACCGGCCAAAACATCCACGCCTGGATCGATTTCAACGGCGAGAGTCTCGAATTCAACGTAAGGGTCGCCCCAATCGGCGTTCCGCGCCCAACGAAGCCCACGCTTAGTTATCTTAATCCCACCATAGCTAACTACGTGTCCGCTGAGATGTTCGTCGGGTTTTCAGCTTCGAAAACGAACTGGATCGAGGCGCAGAGAGTTCTCGCGTGGAGCTTCAGCGATTCGGGGCCAGCGAGGGAGCTCAACACAACGAACTTGCCAGTGTTTGAACCAGAATCGTCGTCTTCCTCGCTTTCTGGCGGCGCAATAGCGGGAATTGTCATCGGTTGTTTTATTTTTGTGCTTATATGCGCTTCTGGTTTTTACTTATGGTGGCGAATCTACAAAGCGAAAGAGGAAGAAGAAGAGATCGAAGATTGGGAGCTAGAGTACTGGCCGCATAGATTTTCCTACGAGGAGTTAAGTTCAGCGACAGGGGAGTTTCGGAAGGAGATGCTGTTAGGTTCCGGAGGGTTCGGGAGAGTGTACAGAGGGACGTTACCGAACAACACGCAAATTGCGGTGAAGTGCGTGAACCACGATTCGAAGCAAGGGTTGCGGGAATTCATGGCAGAGATATCGAGCATGGGGAGGCTGCAGCATAAGAACTTGGTTCAAATGCGAGGGTGGTGTAGAAAGGGGAACGAGCTTATGTTGGTTTATGATTACATGCCTAATAGGAGTCTCAACAAGTGGGTTTTCGACCGGCCGGAGAAGCTTCTAGGGTGGGAGCAACGGCGTCGTATCCTTGTCGACGTGGCAGAGGGGCTTAACTACCTTCACCACGGTTGGGACCAGGTTGTTATTCATAGGGATATAAAATCCAGCAACATTTTGTTGGACGCAGACATGAGAGGGAGACTAGGGGACTTTGGTCTGGCGAAGCTTTACACGCACGGGGAGGTTCCCAACACCACACGTGTCGTGGGGACGTTGGGGTACTTGGCGCCGGAGTTGGCCACGGTTGCGGCGCCCACTTCGGCGAGTGACGTGTACAGCTTCGGGGTGGTGCTGTTGGAGGTGGCGTGCGGGAGGCGGCCGATTGAGACGTCGGTGGCGGACGAGGAGGAGGTGGTGCTCATTGATTGGGTGAGGGACTTGTACGCGAAAGGGTGCGCGCGTGACGCTGCGGATGCGAGGATTAGAGGGGAGTACGATGAGGGAGACATGGAGATGGTGTTGAAGCTTGGGTTGGCTTGTTGCCACCCTGATCCTCAGAGGAGACCCACCATGAAGGAGGTAGTTGCGCTTCTCCTCGGAGAGGAACCGCCGGAGGCTCCCGGAAAAGTCTTGTCCGATTTGGTTCGCGGCGGCGAGGATTTGGATGAGACCGCGCCTTTGCAATCCTCCCCTCCGGTTTGA 2004 0.5524 MMSHSKTPVAGETKFSGMAFLILLHLSIFMTPALSLDFLFNSFAGVTNLTLVKDARVDASVIRMNNDSNQYSYGRAFYPMKIPMRKNSSNSSSVSSFSTSFVFSILPQISTSPGFGLAFVLCNTTDPPGALASQYFGLFTNATSPSVFPLVAVEFDTGRNPEFNDIDDNHLGIDLNNIESINATTAGYYNSSGAFVPVRMRTGQNIHAWIDFNGESLEFNVRVAPIGVPRPTKPTLSYLNPTIANYVSAEMFVGFSASKTNWIEAQRVLAWSFSDSGPARELNTTNLPVFEPESSSSSLSGGAIAGIVIGCFIFVLICASGFYLWWRIYKAKEEEEEIEDWELEYWPHRFSYEELSSATGEFRKEMLLGSGGFGRVYRGTLPNNTQIAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNRSLNKWVFDRPEKLLGWEQRRRILVDVAEGLNYLHHGWDQVVIHRDIKSSNILLDADMRGRLGDFGLAKLYTHGEVPNTTRVVGTLGYLAPELATVAAPTSASDVYSFGVVLLEVACGRRPIETSVADEEEVVLIDWVRDLYAKGCARDAADARIRGEYDEGDMEMVLKLGLACCHPDPQRRPTMKEVVALLLGEEPPEAPGKVLSDLVRGGEDLDETAPLQSSPPV 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01455 667 Gene3D Transferase(Phosphotransferase) domain 1 438 640 - -
Pumo4g01455 667 SMART serkin_6 362 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01455 667 MobiDBLite consensus disorder prediction 637 667 - -
Pumo4g01455 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Pumo4g01455 667 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Pumo4g01455 667 Gene3D Phosphorylase Kinase; domain 1 347 437 - -
Pumo4g01455 667 ProSiteProfiles Protein kinase domain profile. 362 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01455 667 FunFam L-type lectin-domain containing receptor kinase S.1 347 437 - -
Pumo4g01455 667 PANTHER - 61 636 - -
Pumo4g01455 667 Gene3D - 34 291 - -
Pumo4g01455 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 290 IPR013320 -
Pumo4g01455 667 Pfam Protein kinase domain 363 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01455 667 ProSitePatterns Legume lectins beta-chain signature. 151 157 IPR019825 -
Pumo4g01455 667 CDD lectin_legume_LecRK_Arcelin_ConA 36 277 IPR001220 GO:0030246
Pumo4g01455 667 CDD STKc_IRAK 368 632 - -
Pumo4g01455 667 FunFam L-type lectin-domain containing receptor kinase S.4 34 281 - -
Pumo4g01455 667 Pfam Legume lectin domain 36 287 IPR001220 GO:0030246
Pumo4g01455 667 FunFam L-type lectin-domain containing receptor kinase S.4 438 643 - -
Pumo4g01455 667 SUPERFAMILY Protein kinase-like (PK-like) 339 632 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01455 Pumo-Chr4 18453678 18455905 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01455 35 634 Receptor kinase-like Gene Family AT1G15530 68.812 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pumo4g01455 Pkinase 1.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01455 - - gmx:100780660 1217.99