Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01453 ATGGAAGATGTGAATGGCACCCCAAGAGAAGCAAAGGATTACTATTCTAGATCAATATGGTTGTCAGAAACTGCGCAGGTATTTGGGGATCCCAAGAGAAGTGACAGAAATGTTGTTAATGGCATCGATTTTAATGCTGGCAGAGATTCCTACGGCTATAACTCCCTAGAAATAGTGACTCCTGAAATTTCTGGAACATTTGATGAAATCAAAGGTTTAATCAGAGTTAATGATGAGGTTGTTGGTGAAGAAAACGGTGACTATGACTACTATTCTAGACAATCGTTGACAACAGAAATTGTGGAAATAGTTGAAGATGGCAAGAGCATAAGCACCAAAGATAGAAGAGTTGATGATCTTTATGTGGCTGTTGGCAAAGATGACTTGGATGTAGTGAAATGGGCTCTTGATCATGCTGTTTCTCCCGGTTCCCGGATTTTTCTTATCCATGTCTCTTCTCCAATCACATTGATTCCTACGCCAGTTGGAAAGTTTGAAAGAAGTCAACTGACCCCGCAACAAGTGAGACTATACGTGAATGAGGTGAACAACAAGAGGAAGGATCTTTTGCAAAAGTACATTCAAATGAGTGATGAAGCCAAGGTAACTGCAGAAACGTTGCTTCTGGAGAGCAATGACACAGGAAAGGCAATTCTGGACCTCATCTCTATTCTTAACATAACCAACCTTGTCATTGGAATCAAAAAGCTACCCTACACACGGCGCAATAACAGATTGAGCAAAGGAGAGTTCGTAAAGAAACATGCACCGAATTCCTGTGAAGTTACTTTGGTTTATAATGGCGAGGTGTTTGTGTCTGACCCTTACATGGATGGCTTGGTATCCTACGGCCCAGGATCACAAAATAAAAATCACTCGAAAGGCCAACTTCCTTCATTGCATGTGCTTTTCAGGCAAGTGCAGTCAACTATTGATCTTCTCTCTAAACTTTTGTAA 957 0.4096 MEDVNGTPREAKDYYSRSIWLSETAQVFGDPKRSDRNVVNGIDFNAGRDSYGYNSLEIVTPEISGTFDEIKGLIRVNDEVVGEENGDYDYYSRQSLTTEIVEIVEDGKSISTKDRRVDDLYVAVGKDDLDVVKWALDHAVSPGSRIFLIHVSSPITLIPTPVGKFERSQLTPQQVRLYVNEVNNKRKDLLQKYIQMSDEAKVTAETLLLESNDTGKAILDLISILNITNLVIGIKKLPYTRRNNRLSKGEFVKKHAPNSCEVTLVYNGEVFVSDPYMDGLVSYGPGSQNKNHSKGQLPSLHVLFRQVQSTIDLLSKLL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01453 318 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 83 285 - -
Pumo4g01453 318 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 128 265 - -
Pumo4g01453 318 Coils Coil 179 199 - -
Pumo4g01453 318 Gene3D HUPs 122 265 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01453 Pumo-Chr4 18437980 18439815 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01453 115 268 U-box Gene Family AT2G45910 30.435 1.65e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01453 - - gmx:102668724 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01453 4 18437980 18439815 Pumo4g01453 4 18437980 18439815 ECH