Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01421 ATGCAGACCTCAGTTTTTTCTTTCTCCTCTTCCCTCTCTCTCCGCAAACCTCACACAACCCGTGTCTCTGCTTCCACTTCAAAACTCAACGTCATTCTCACTTCCTCTTCCTCTTCCTTCCCATGTCAACCATGCTCTCTTGCTTCTTCTTCTCTCTCTTTCAAACTCGCTCCTTCTCACTCTCACCCCTTTCTTCATGTCAGAGCAACCTCCGTGCCGGAGAGCAGCGCCGGCGAGTTCTCCGGCGGCAACACTCTCCTCAATATTCTGGAACTGGGAGCCCTGTTTGGGCTCTGGATCCTCTTCAACATCTACTTCAACATCTACAACAAGCAGGTCTTAAAGGTTTACCATTTCCCTTTAACTGTAAGCACCCTTCAGTTCGCTGTGGGGACTCTCTTCGTAGCATTCATGTGGGGTTTTAATCTCTACAAGAGACCTAAACTTAGTGCTGCCCAGCTTGCAGCGATATTGCCACTGGCTCTGGTACATACTTTAGGGAACCTTTTTACTAACATGAGTCTCGGAAAGGTTGCTGTGTCGTTCACTCACACAATAAAAGCGATGGAGCCTTTTTTTTCAGTGCTCCTTTCTGCTATGTTCCTTGGAGAGACGCCTACTGCATGGGTGGTTGGTTCCCTTGTGCCTATTGTTGGTGGGGTGGCGTTAGCCTCTGCTACCGAGGCATCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAATTTGACAAATCAATCTCGTAATGTTCTTAGCAAAAAGCTCATGGTAAACAAGGACAAGGAGGAATCTATGGACAATATAACCCTCTTCTCAATAATAACGGTTATGTCCTTCTTGTTATCAGTACCTGTAACTTTGTTAATGGAGGGTGTCAAATTTACCCCTACTTACCTGCAATCTGCTGGATTAAATGTTAACGAAGTGTACATCAGATCTCTTCTTGCTGCACTATGTTTCCATGCGTATCAGCAAGTTTCTTATATGATACTGCAGAAGGTGTCACCTGTTACCCACTCGGTAGGAAATTGTGTGAAAAGGGTTGTGGTCATCGTGAGCTCTGTCATCTTCTTCCAAACACCAGTATCACCAATTAACGCATTGGGGACTGCTATAGCTCTTGCCGGTGTTTTCTTGTATTCCAGGGTGAAGCGACTCTAG 1164 0.4588 MQTSVFSFSSSLSLRKPHTTRVSASTSKLNVILTSSSSSFPCQPCSLASSSLSFKLAPSHSHPFLHVRATSVPESSAGEFSGGNTLLNILELGALFGLWILFNIYFNIYNKQVLKVYHFPLTVSTLQFAVGTLFVAFMWGFNLYKRPKLSAAQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSAMFLGETPTAWVVGSLVPIVGGVALASATEASFNWAGFWSAMASNLTNQSRNVLSKKLMVNKDKEESMDNITLFSIITVMSFLLSVPVTLLMEGVKFTPTYLQSAGLNVNEVYIRSLLAALCFHAYQQVSYMILQKVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINALGTAIALAGVFLYSRVKRL 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01421 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 136 225 - -
Pumo4g01421 387 Pfam Triose-phosphate Transporter family 91 382 IPR004853 -
Pumo4g01421 387 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 90 386 IPR004696 GO:0016020|GO:0022857|GO:0055085
Pumo4g01421 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 310 384 - -
Pumo4g01421 387 PANTHER SOLUTE CARRIER FAMILY 35 91 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01421 Pumo-Chr4 18001106 18004156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01421 1 385 Antiporters AT5G33320 67.164 4.87e-172 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01421 K15283 - gmx:100780925 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01421 4 18001106 18004156 Pumo4g01421 4 18001106 18004156 ECH