Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01418 ATGTATACATTTCTGTATGACTTTGCAAAGGACAGAAAGGATTTGGGGCACAAACTATTCCTGCCTTGGACTGGATGGGTGTGTGTTTGGACTGCCGCGTTGCTCTTCTTGCTGGCCATTCTTGGTGCATGCTCCATAATCAACAGATTCACACGCCTTGCAGGTGAACTATTTGGTCTGCTAATTGCAATGCTCTTTATGCAGCAGGCTATAAGGGGACTAGTGGAAGAGTTTCGTGTGCCCCAGTCCCAGAGAGAAGGTACCAATCAGATTGCACTCCAATCCTCTTGGCTGTTTGGCAATGGAATGTTTGCTTTGGTTTTGTCATTTGGCCTTCTGTTTACTGCACTTAGAAGCCGCAAGGCTAGATCCTGGCGATATGGGGCAGGATGGTTGCGGGGATTTGTAGCTGATTATGGAGTCCCACTAATGATTCTTGTGTGGACTGCTGTGTCTTATATGCCAACCAATAAAGTTCCAAGGGGAATCCCAAGGCGACTTTTCAGTCCAAATCCATGGTCTCCTGGTGCATACTCAAATTGGACTGTAATTAAGGAAATGTTGAATGTGCCTCTCATCTATATTATTGGAGCATTTATACCGGCAACTATGATTGCCGTTCTTTACTACTTTGATCACAGTGTTGCATCACAACTTGCCCAGCAGAAGGAGTTCAATCTACGAAAACCCTCATCTTATCATTATGACCTTCTCCTCTTGGGCTTCTTGACCATATTATGTGGGCTTATTGGAATCCCTCCAGCCAACGGTGTGATTCCTCAATCTCCAATGCATACTAAAAGCTTAGCTACTCTAAAACATCAGCTCTTGCGGAATAAGCTTGTATCTGCTGCACGAAAAAGCATGCAGAAAAATATGAACCTGAGTCAGTTATACCGAAGTATGCAAGAAGCATATAATCAAATGCAGACTCCATTGGCCCACCAAATACCACCTGCCTTGGGGCTAAAGGAGCTGAAGGAATCCACCATCCAACTGGCTTCAAGTCATGGATACATTGATTCCCCTGTTGATGAGGTTGTTTTCGATATGGATAAGGATGTTGATGACCTTTTGCCAGTTGAAGTTAAAGAACAGCGCCTCAGCAATCTGCTGCAGGCATTGATGGTTGCAGCTTGTGTTGCTGCTATGCCTATTTTGAAGAAGATACCAACTTCAGTGCTTTGGGGTTACTTTGCTTTCATGGCAATTGAAAGCTTGCCCGGAAATCAGTTTTGGGAGAGAATACTATATCTTTTCACTGCTCCAAGTCGAAGATACAAAGTGCTGGAGAATCACCATGCCGCCTTTCTTGAGACCGTGCCCTTCAAAACGGTTGCCACGTTTACCTTATTCCAGACAGCTTACTTGCTTCTCTGCTTTGGTCTAACCTGGATACCAATTGCTGGGGTCCTTTTCCCATTGTTAATCATGCTTCTTATCCCAGTACGCCAATATTTCCTTCCCAAGTTTTTTAAAGGAGCCCATCTTCAAGAGTTGGATGCTGCAGCATACGAGGAAGCACCTGCTATTAGTTTCAACTTGTCATTCGAAGATTCAGGTAGTCAGACAACAACAGTCAATAATATTAGTGGGGAAATTCTTGACGAAATTATTACAAGGAGTCGTGGAGAGATCTGCCTCAATCAAAAATCAAGGAGTTCAACTCCAACATCATGTGGAGTTGACTCAATTCAGAGGGGAAAGCAACCTAGGATCAATCATGATCATGAAGGAGATCAAGATCAAGAAAAGTACTAG 1761 0.4378 MYTFLYDFAKDRKDLGHKLFLPWTGWVCVWTAALLFLLAILGACSIINRFTRLAGELFGLLIAMLFMQQAIRGLVEEFRVPQSQREGTNQIALQSSWLFGNGMFALVLSFGLLFTALRSRKARSWRYGAGWLRGFVADYGVPLMILVWTAVSYMPTNKVPRGIPRRLFSPNPWSPGAYSNWTVIKEMLNVPLIYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPANGVIPQSPMHTKSLATLKHQLLRNKLVSAARKSMQKNMNLSQLYRSMQEAYNQMQTPLAHQIPPALGLKELKESTIQLASSHGYIDSPVDEVVFDMDKDVDDLLPVEVKEQRLSNLLQALMVAACVAAMPILKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKVLENHHAAFLETVPFKTVATFTLFQTAYLLLCFGLTWIPIAGVLFPLLIMLLIPVRQYFLPKFFKGAHLQELDAAAYEEAPAISFNLSFEDSGSQTTTVNNISGEILDEIITRSRGEICLNQKSRSSTPTSCGVDSIQRGKQPRINHDHEGDQDQEKY 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01418 586 MobiDBLite consensus disorder prediction 569 586 - -
Pumo4g01418 586 MobiDBLite consensus disorder prediction 551 565 - -
Pumo4g01418 586 MobiDBLite consensus disorder prediction 551 586 - -
Pumo4g01418 586 PANTHER ANION EXCHANGE PROTEIN 1 509 IPR003020 GO:0005452|GO:0006820|GO:0016020
Pumo4g01418 586 Pfam HCO3- transporter family 19 81 IPR011531 GO:0006820|GO:0016020
Pumo4g01418 586 Pfam HCO3- transporter family 361 451 IPR011531 GO:0006820|GO:0016020
Pumo4g01418 586 Pfam HCO3- transporter family 103 274 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01418 Pumo-Chr4 17976156 17982405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01418 1 573 Antiporters AT3G62270 72.870 0.0 856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01418 K24194 - gmx:100815420 1060.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01418 4 17976156 17982405 Pumo4g01418 4 17976156 17982405 ECH
Pumo4g01418 4 17976156 17982405 Pumo10g02026 10 26897503 26903801 PCT