Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01411 ATGCTTATTATTTTCAATTTGGATGGGAGTCCACCAGCTTACCATTTTGATAAGGGATTTGGAGCAGGGATTAACAATTGGTTGGTTACATTTGAGGTGAACGATTTGAAGTTAAATATGAACACAATCAACAATGTAGCTATAGCAACTGGGACAGCTGTCACATGCTCAGTGACAGTTAACTTAACGGGCACTTCAGAGGAGCAAGGAATTTGCGTCAATCATGCACTTCAAGACTTAGCCCAACGCTGTGCTTTTTTCCCACAATATTTGGTGTCACGTATCACTACACCAATCTTTTTTGTAAACACAGCATACGACTCATGGCAGCTCTTAATAACTAGAGATCTTTCTAGTCCTTACCCTGATCTTCAAGATGTTGCTTTGGTTCAGATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCGCAATGTCATTGGCATAGTTGCAAGCTTGATATAAACAACTACTCACCTGATCAACTTAATTGA 492 0.4004 MLIIFNLDGSPPAYHFDKGFGAGINNWLVTFEVNDLKLNMNTINNVAIATGTAVTCSVTVNLTGTSEEQGICVNHALQDLAQRCAFFPQYLVSRITTPIFFVNTAYDSWQLLITRDLSSPYPDLQDVALVQIKNILAPGVADPQCHWHSCKLDINNYSPDQLN 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01411 163 Pfam Pectinacetylesterase 76 162 IPR004963 GO:0016787
Pumo4g01411 163 Pfam Pectinacetylesterase 7 37 IPR004963 GO:0016787
Pumo4g01411 163 PANTHER NOTUM-RELATED 60 162 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01411 Pumo-Chr4 17923186 17925823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01411 7 32 Carbohydrate Esterase AT4G19420 69.231 1.70e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01411 K19882 - gmx:100776478 106.301