Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01397 ATGAAGGAAAGCAGTGATGGGTTTGTGAGAGCGGATCAGATTGATCTGAAGAGCATAGATGAACAGTTGGAGAGGCACCTCAGCAAGGTGTTGACTATAGATAAGAAAAAGCATGAGGAAGATGCTGATCATGTTCATGTTCACACCAGTGCCACTGCTTCTCCCAAATTCTCACATGCCTCTTCTGCTGCTAGGCTGAACTTCAAAAAGAAAAAGCAGGACTGGGAGATTGATCCTTCTAAACTCATAATCAAGACTGTTATAGCTCGTGGCACTTTTGGCACAGTCCATCGTGGTGTCTATGATACCCAAGATGTTGCTGTGAAATTGTTGGACTGGGGGGAAGAAGGACAAAGGACAGAAGCAGAAATTGCCTCCCTGAGGGCAGCGTTTACACAGGAAGTTGCTGTTTGGCATAAACTTGATCACCCCAATGTCACAAAGTTTATAGGGGCAACAATGGGGTCTTCAGAATTGCAGATACAAACTGATAATGGTCTAATTGGCATGCCAAGCAATGTCTGTTGTGTTGTTGTTGAGTATCTTGCTGGAGGTAATCTGAAACAATACCTAATAAAGAACAGGAGGAGGAAGTTAGCTTTTAAAGTTGTCATCCAGCTGGCACTTGATCTTGCTAGAGGGCTGAGTTATCTTCACTCTCAGAAGATTGTCCATAGAGATGTAAAGACAGAGAACATGCTGTTGGATAAGACACGCACAGTTAAAATTGCTGATTTTGGGGTTGCACGTGTTGAGGCATCGAATCCTAACGATATGACTGGGGAGACTGGTACTCTTGGTTATATGGCTCCAGAGGTTTTAAATGGCAACCCCTATAACAGGAAATGTGATGTGTACAGTTTTGGCATCTGTTTATGGGAAATATATTGTTGTGACATGCCATATCCTGACCTAAGTTTCTCAGAAATTACTTCAGCTGTTGTTCGCCAGAATTTAAGACCAGAAGTGCCAAGATGTTGCCCAAGTTCTCTAGCAAATGTAATGAAGAAGTGCTGGGATGCGAGTCCCGATAAGCGGCCGGAGATGGATGAGGTAGTTTCCATGCTGGAGGCCATTGACACATCCAAAGGTGGAGGTATGATCCCTCTTGATCAGCAGCAGGGTTGTTTTTGCTTCCGCAAGCATAGAGGGCCTTGA 1158 0.4421 MKESSDGFVRADQIDLKSIDEQLERHLSKVLTIDKKKHEEDADHVHVHTSATASPKFSHASSAARLNFKKKKQDWEIDPSKLIIKTVIARGTFGTVHRGVYDTQDVAVKLLDWGEEGQRTEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGSSELQIQTDNGLIGMPSNVCCVVVEYLAGGNLKQYLIKNRRRKLAFKVVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEITSAVVRQNLRPEVPRCCPSSLANVMKKCWDASPDKRPEMDEVVSMLEAIDTSKGGGMIPLDQQQGCFCFRKHRGP 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01397 385 SUPERFAMILY Protein kinase-like (PK-like) 63 356 IPR011009 -
Pumo4g01397 385 Gene3D Transferase(Phosphotransferase) domain 1 183 374 - -
Pumo4g01397 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Pumo4g01397 385 FunFam Serine/threonine-protein kinase HT1 182 367 - -
Pumo4g01397 385 Pfam Protein tyrosine and serine/threonine kinase 84 356 IPR001245 GO:0004672|GO:0006468
Pumo4g01397 385 CDD STKc_MAP3K-like 88 356 - -
Pumo4g01397 385 PRINTS Tyrosine kinase catalytic domain signature 283 305 IPR001245 GO:0004672|GO:0006468
Pumo4g01397 385 PRINTS Tyrosine kinase catalytic domain signature 327 349 IPR001245 GO:0004672|GO:0006468
Pumo4g01397 385 PRINTS Tyrosine kinase catalytic domain signature 179 192 IPR001245 GO:0004672|GO:0006468
Pumo4g01397 385 PRINTS Tyrosine kinase catalytic domain signature 217 235 IPR001245 GO:0004672|GO:0006468
Pumo4g01397 385 FunFam Kinase suppressor of Ras 1 71 166 - -
Pumo4g01397 385 Gene3D Phosphorylase Kinase; domain 1 70 165 - -
Pumo4g01397 385 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 56 359 - -
Pumo4g01397 385 ProSiteProfiles Protein kinase domain profile. 82 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01397 385 SMART serkin_6 82 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01397 Pumo-Chr4 17710962 17717904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01397 1 317 MAP Kinase Kinase Kinase AT5G50000 80.251 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pumo4g01397 PK_Tyr_Ser-Thr 7.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01397 - - gmx:100807921 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01397 4 17710962 17717904 Pumo4g01397 4 17710962 17717904 ECH