Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01383 ATGGAGAAGTTGAATTTTAGAAGCTCAGTAAGCCAGATCAAGGTCATGGGCACAGTGCTGTCCATCCCTGGAGCATTAATCGTGACCCTTTACAAGGGCAGTCCCATGCCCATCATCAGCTTTCGAACTCAACCCTCTCCATCACAACCACTGCCATCTTTGTTGGCTGAAACCAGTAACTGGGTCATTGGGGGTCTCTTCTTTGCCACTGCCTCTCTCTCTATTGGAGCCTGGAATATTACTCAGGTAGCAATTTTGAAAGGATATTCATCCCAGGTAACCATATTAGCCTACTATTGCCTGTTTGGACCCATCCAAAGTGCAATACTTTCTCTCATTGTAGTCAGAGAAACAAATGACTGGAAAATAAGCCCCGACATTGAGCTCATCGCTATATTCTATTCAACCACAACACCTCCTCGCATGGCCACGACCACCACAAATCTACTCTTTCTCTCAAATGTCAAGCCTCTCGTAGAGGATACGGTGCCGCTAATCTGTCGTTACGGTGTCCTCATCGCTGTGGTTGCTAAGCTTGGTCAACGCGTAGGAAGTTGA 558 0.4677 MEKLNFRSSVSQIKVMGTVLSIPGALIVTLYKGSPMPIISFRTQPSPSQPLPSLLAETSNWVIGGLFFATASLSIGAWNITQVAILKGYSSQVTILAYYCLFGPIQSAILSLIVVRETNDWKISPDIELIAIFYSTTTPPRMATTTTNLLFLSNVKPLVEDTVPLICRYGVLIAVVAKLGQRVGS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01383 185 PANTHER WAT1-RELATED PROTEIN 1 136 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01383 Pumo-Chr4 17560353 17565681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01383 1 135 Nodulin-like Gene Family AT5G40240 36.765 3.30e-21 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01383 - - gmx:102659936 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01191 8 43207770 43212544 Pumo4g01383 4 17560353 17565681 ECH
Pumo4g01383 4 17560353 17565681 Pumo4g01383 4 17560353 17565681 ECH