Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01382 ATGGGAGTGAGACGCAATTTGGTGGAATGGAGTCCATTCTTAGCGATGGTGACTGTGGAGTGCCTTGACGTGGGGCTGTCCACGTTGAGTAAAGCAGCCATGTCCACAGGAATGAACCACTTCGTCTTTGTTGTATACTCCAATGCTCTTGCAACTCTCATACTCCTCCTTTCCTCTTTCTTCATACACAGGTACAGAACAACAGGACCACCCCTTTCTTTCTCGCTTTTCTGCATGTTCTTCCTCCTCGGCCTTCTTGGCGTAACTGTCAAGCAGAATTGCGTTTTCACCGGCATTGACTACAGCTCTCCCACCCTTGGAACCGCTATGGGCAATTTGACTCCAGCAATAACTTTTGTGCTAGCGGTTACCCTCAGGATGGAGAAGTTGAATATTGGAAGCTCAATAAGCCAGATCAAGGTCATGGGCACAGTGCTGTCCATTGCTGGAGCATTGGTCGTGACCCTTTACAAGGGAAGTTCCATCAGCACCTTTCAAATTCAACCCTCTCCATCACCACCACTGCCATTGTTGGCTGAAACCAGTAACTGGGTCATTGGAAGTCTCTTCTTTGCCACTGCCTCTCTTTCTCTTGCAGCCTGGAATATTATTACTCAGGCAGTAATTCTGAAAGGATATTCATCTCAGTTAACCATGGTAGCCTACTATTGCCTGTTTGGAACCATCCAAAGTGCAATACTTTCTCTCATTGTAGTCAGAGATCTAAATGCCTGGAAAATAAGCCCTGACGTTGAGCTCATCTGTATATTCTATTCAGCTATTGTCGGAAGTGTGGTGACATTTTCTGTAACGACATGGTGCATAGAAAGGAAAGGACCTGTATTTGTTAGCATATTCAAGCCTGTGGGGATTGCCATTGCTGCCTTTTCGAGTGTTGCCTTCCTTGGCGAAACACTCCATGTTGGCAGTATCATTGGCGCAGTGATAATCGCCATCGGATTTTACACGGTATTGTGGGCACAATCAAAAGAGGAAAATGCCAAGGACCAAGAAATTGATAGAAAATCATCCCCGTCTGCCCAAGCGAGTCCTCTACTAGAGTCCCACGAAAGAAACGTTTTAGCATAA 1089 0.4601 MGVRRNLVEWSPFLAMVTVECLDVGLSTLSKAAMSTGMNHFVFVVYSNALATLILLLSSFFIHRYRTTGPPLSFSLFCMFFLLGLLGVTVKQNCVFTGIDYSSPTLGTAMGNLTPAITFVLAVTLRMEKLNIGSSISQIKVMGTVLSIAGALVVTLYKGSSISTFQIQPSPSPPLPLLAETSNWVIGSLFFATASLSLAAWNIITQAVILKGYSSQLTMVAYYCLFGTIQSAILSLIVVRDLNAWKISPDVELICIFYSAIVGSVVTFSVTTWCIERKGPVFVSIFKPVGIAIAAFSSVAFLGETLHVGSIIGAVIIAIGFYTVLWAQSKEENAKDQEIDRKSSPSAQASPLLESHERNVLA 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01382 362 PANTHER WAT1-RELATED PROTEIN 12 337 IPR030184 GO:0016020|GO:0022857
Pumo4g01382 362 MobiDBLite consensus disorder prediction 334 362 - -
Pumo4g01382 362 Pfam EamA-like transporter family 186 325 IPR000620 GO:0016020
Pumo4g01382 362 Pfam EamA-like transporter family 25 155 IPR000620 GO:0016020
Pumo4g01382 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 330 - -
Pumo4g01382 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01382 Pumo-Chr4 17553815 17556466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01382 12 359 Nodulin-like Gene Family AT3G28050 41.436 1.11e-79 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01382 - - psat:127073896 428.328