Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01374 ATGTCGCTCAAGCGGCGCCCCGATGATGGCAAGACTCCAGACGACAAGCGTAGAAAGCCTCCTCCTTTCTCCAGTGTGGTGCGTGACGTGATGAAGTTACAGTCACTCGGGCATTTGCTGGAGCCAATTCTAGAGCCTTTGGTTCGTAAAGTGGTTAAGGAAGAAGTTGAAGCTGCCCTAAAGAGACATTTAACCAGCATGAAACAGACCTGTGGAAAGGAGTTGCATACTACTGAATTAAGAAATTTGCAGCTGCAGTTTGAAAACAGCATTTGTCTTCCTGTCTTTACAGGAGCTCGAATTGAAGGAGAGGATGGCTCCAACTTAAGAATAAGTTTAGTTGATGCCCTAACAGGGAAGGTTGTTAGTACAGGACCTGAATCATTGGCTAAGGTGGAAATTGTAGTCCTTGAGGGTGATTTTGAAGAAGAAAGTGAAATTTGGATGCCTGAAGAGTTCAAGAGCAATATTGTGAGAGAGAGGGAAGGAAAAAAGCCCCTTCTTACAGGAGATGTAATTTTATATCTAAAAGATGGGGTTGGTATGGTGGGTGAAATTTCATATACAGATAATTCAAGCTGGACAAGGAGCCGTAGGTTCAGGCTTGGGGCAAGAGTCGTGGACAACTTTGATGGTGTTAGAATAAGAGAAGCAAAGACAGAATCATTCATTGTCAGGGATCACAGAGGAGAACTGTACAAGAAGCACCATCCTCCTAGTCTGTCTGATGAAGTTTGGAGATTGGAAAAGATAGGCAAGGATGGAGCTTTCCACAAGCGTTTGAGTCGGGAAAAGATCCTTACTGTTAGAGAGTTTCTCACACTTCTCAATCTGGATCCAGCAAAGCTGCGCAGTATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCATGCTCGAACTTGTGTAATTGATACAACGAGGCACGTGTACGTCCCTTCTAATTCTCAACAACCTGGTGTGGTCTTCAATGCTGTGGGACAAGTGACAGGACTGCTTTCTGAATGCGAGTATGTCGCAGTAGATAAGCTGTCTGAAACTGAAAAGGCTGATGCTCAAAACTCAGTAACTGCTGCATTAAGACAAGGGGAGAAATACAAAACTTTCGAAGATGAAGACTCTCTCATGGATGGATCTTCACACTTAACTAATGTACATTACTCCCCAAGCTCTCCCAAGACTGAGGGATCAAGTGCCAACAAGCTTACGGCTCCTCAAAAGACTGGAGGATTCAATTACCCGCAAGCAAGTGCCTCTTCTCCAGATATCATGTCATCCATTTATTCTGTTGGTGGAACTAGTAGCTTGGATGACTATTGCTTGCCTAATTTTGACAGCATGGGCCTTAGATATGATCAGACCCTCAGTTTTCCAGTCCAAGTCTCCAACTCTTTGATCTGTGACACTGATTCAATGGCTCATGCTTTTAGTGACGAAGATCATCTGCAATTTTTTGATACTGATCTTCAATCTCACGTTCAAGCAGATTTACAGAGTGCTGTTGATAGCTTCATCCTGGCACGTACTACAGCCAATGGTGGTGCTGGTGCACAGAGGAGATGGAGAAAGGTATGCAATGTCCTAAAATGGTTCATGGTTAGGAAACGAGGAAACAAAATACAGGTAAGGTTGTGA 1647 0.4408 MSLKRRPDDGKTPDDKRRKPPPFSSVVRDVMKLQSLGHLLEPILEPLVRKVVKEEVEAALKRHLTSMKQTCGKELHTTELRNLQLQFENSICLPVFTGARIEGEDGSNLRISLVDALTGKVVSTGPESLAKVEIVVLEGDFEEESEIWMPEEFKSNIVREREGKKPLLTGDVILYLKDGVGMVGEISYTDNSSWTRSRRFRLGARVVDNFDGVRIREAKTESFIVRDHRGELYKKHHPPSLSDEVWRLEKIGKDGAFHKRLSREKILTVREFLTLLNLDPAKLRSILGTGMSAKMWEVTVEHARTCVIDTTRHVYVPSNSQQPGVVFNAVGQVTGLLSECEYVAVDKLSETEKADAQNSVTAALRQGEKYKTFEDEDSLMDGSSHLTNVHYSPSSPKTEGSSANKLTAPQKTGGFNYPQASASSPDIMSSIYSVGGTSSLDDYCLPNFDSMGLRYDQTLSFPVQVSNSLICDTDSMAHAFSDEDHLQFFDTDLQSHVQADLQSAVDSFILARTTANGGAGAQRRWRKVCNVLKWFMVRKRGNKIQVRL 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01374 548 Pfam Calmodulin binding protein-like N-terminal domain 83 228 IPR046831 -
Pumo4g01374 548 MobiDBLite consensus disorder prediction 1 23 - -
Pumo4g01374 548 PANTHER OS02G0177800 PROTEIN 16 432 IPR012416 GO:0005516
Pumo4g01374 548 Pfam Calmodulin binding protein C-terminal domain 313 370 IPR046829 -
Pumo4g01374 548 Pfam Calmodulin binding protein central domain 240 306 IPR046830 -
Pumo4g01374 548 MobiDBLite consensus disorder prediction 382 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01374 Pumo-Chr4 17434924 17440387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01374 1 354 Calmodulin-binding Proteins AT5G62570 60.111 1.74e-155 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01374 - - gmx:100793156 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01374 4 17434924 17440387 Pumo4g01374 4 17434924 17440387 ECH