Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01359 ATGACGGATTATTCCATGCCGGGGATGACAGGATATGAATTACTCAAGAAAATCAAGCAGGAGTCTTCTGTGTTTAGAGAGATTCCGGTGGTGGTTATGTCGTCGGAGAATGTGTTGACTCGAATTGATAGGTGCCTGGAGGAAGGAGCAGAGGAGTTTCTATTGAAGCCAGTCAAATTGTCCGATGTAAGACGCTTGAAAGATTTCATCATGAAAGGGAAAGTGAAGGAAGGGGAGAAAATATCTCACAAAAGAATGAGGTCAATTGATTGCATTCCACCTCTATCTGCAACATGCTCACCAATGTCTCTTCCATGCGATCCATCACCATCATTGCTCTCACCATTATCCTCAAAGAAGGCTAGATTGTGA 372 0.4328 MTDYSMPGMTGYELLKKIKQESSVFREIPVVVMSSENVLTRIDRCLEEGAEEFLLKPVKLSDVRRLKDFIMKGKVKEGEKISHKRMRSIDCIPPLSATCSPMSLPCDPSPSLLSPLSSKKARL 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01359 123 ProSiteProfiles Response regulatory domain profile. 1 71 IPR001789 GO:0000160
Pumo4g01359 123 SUPERFAMILY CheY-like 2 72 IPR011006 -
Pumo4g01359 123 Gene3D - 1 90 - -
Pumo4g01359 123 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 79 IPR045279 GO:0009736
Pumo4g01359 123 Pfam Response regulator receiver domain 2 64 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01359 Pumo-Chr4 17222771 17224403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01359 1 85 Response Regulator Gene Family AT3G48100 76.471 2.44e-41 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo4g01359 Response_reg 3.9e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01359 K14492 - gmx:100527518 190.66