Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01358 ATGTCGGTCCCAAGTCAAACAATTGCAATAGCAGTGGCAGCTACAGCAGCAGCTATGTTACTTTTTGCCGTGACATTTTTTTACTTCTTCCAAAAATTTGTTCTTGCTCGATACCACCATAAGCACATAGTTGCAGCAAGTTTTCTTAGAGAAGCAGGAATGAACCATGAGGATATAAAGAAAGTTGGTGGCAATATGAAAGGATTACTTGTTGAAGATAATGGCATTGATATTCTGTATATGATGGAAACAGAAGGTATGCAATTCAAAACTAGATTCCCAAATAGAAGATATAATCCTAGTTATGAAGATGATGAAGAAAAGGGAACAGATATAATGGTCCAAAGATCCAAACGAATTAAGCCTCAGGAGGTTACAGTTCCACTGCTATGTGAAACTCCAGGTCCAGGTTTAATTGATCATGAGAATCAAGTTAAGCCACTATCACAAGTATCTTCTGTGCCTTATTCAGTTTCAGCATCTTTGACACCAACTCAACACCAGCCACCTCCTCCACTTCCATCACCACCACAAACTTCACCAATGATTCTTGAGAATAAAACTATATCACCTCGGCCACCACCACCTCCTCCTCCACCACCACCACCACCACCACCTTCCACTCTAAGAATGGAAGTTCCAAAAGCACCACCTTTGCTTTCTTCTCCTATCATGAATAGTGAAGGTGCAGTGTCACCACCAAAGGCCAGTGGTTTCATACCATTACCCCCTAAAGAGAAAGCAAACATAAAAAACACCACAAAGGCTATTATGGTAGGGGAGAGCTCAAGAGGGAATGGTGCTAACCAAACAAGGCTGAAGCCTCTATATTGGGATAAGGTTGTAGCTAATGTTGATCATTCAACAGTGTGGGATCAGATCAGTGATGGCTCATTCTGGTTTGATTATGAACTCATGGAAACACTCTTTGGATATTCAAGTAAAAACCAAACCCATGAAAAAAATAGGTGTCTTTCAACTTCAGCTAAGTCCAACTCCAATACACCAACTCAATTATTCATTCTGGACCCTCGAAAATCCCAAAACATAGCAATTGTGCTAAGATCTCTTGCAATTTCTCGCAAGGGAATCCTAGATGCACTCCATGATGGCCAAGGACTCGGTGCTGAGACATTCGAAAGACTCACTAAAATAGCTCCTACCCAAGAAGAAGAAGCCAAAATCATCCAATTCAGTGGCAATCCAGATAAACTTGCTGATGCTGAGTCATTCCTCTACCACATCCTGAGAGCAGTTCCAACAGCATTCATTCGTTTAAAAGCACTGCTTTTCCAATCGAGTTACGGTTGCGAAGTTATTCAGCTGAAAGAACACCTAAAAACTCTTGAAATGGGTTGTAATGAGATGAAGACTAGTGGTCTGCTTTTGAAATTCCTTGAGGTCATTCTCAAAGCTGGAAACCGAATGAATGCTGGAACTTCAAGAGGCAATGCTCATGGTTTCAACTTAAGTGCTCTTAAAAAGCTCTCTGATGTAAAAAGCACAGATGGGAAGACTAGTTTGCTTCACTTTATTGCTGAGCAGGTAGCTCAGTTTGAAGGAAGACAACAAGCAATTAATCAAAAGCACAACCTTCAGGGAAACATTGGTGAAACAAGCAAAACTCGTGGACCGCATTCAGATAACCTAATGCAACAAGAGGCGCTCAAAGAGTATCTAATGCTAGGTTTGCCAGTGTTAGGAGGGCTAAGGGATGAGTTATGTGAAGTAAAGAAAGCAGCAAGCATTGAGCATCAGAATTTCATTAGTATGTACTCTACTCTCAATGCTTATGTAACTGAAATTCGACAGATTATAACATGCTGTGGTAACAGTGAGAGAGATGGATTTATTAAGGTAATGAAAAGGTTTCTAAAGGAATGTGAGATGGAGCTTAAGGTGGTGAGAGAGGAACAGGCAAGGGTCATGGAACTCGTGAAGAAAACCAATGAATATTATCTAACAGGAGGTTCCAAAGATAACACGACAAACCCCTTTCAACTGTTTGTTACCGTAAAAGAATTTGTTGACATGGTAGATGAAGTTTGCATAGAACTTAGAAGGAAGCTAGAAAGGAATAATGTAGGAGGAGAAGCTGTATCAACACCACCTCTTTCACCATCAAAGAAGGTGCCACTGAGATTACCAAACTTCGATTTACATTTTCTGTCAAGCATGTCAGGAGCAACATCTTCCAGCAAATCAAATGATGATTTTTGA 2220 0.405 MSVPSQTIAIAVAATAAAMLLFAVTFFYFFQKFVLARYHHKHIVAASFLREAGMNHEDIKKVGGNMKGLLVEDNGIDILYMMETEGMQFKTRFPNRRYNPSYEDDEEKGTDIMVQRSKRIKPQEVTVPLLCETPGPGLIDHENQVKPLSQVSSVPYSVSASLTPTQHQPPPPLPSPPQTSPMILENKTISPRPPPPPPPPPPPPPPSTLRMEVPKAPPLLSSPIMNSEGAVSPPKASGFIPLPPKEKANIKNTTKAIMVGESSRGNGANQTRLKPLYWDKVVANVDHSTVWDQISDGSFWFDYELMETLFGYSSKNQTHEKNRCLSTSAKSNSNTPTQLFILDPRKSQNIAIVLRSLAISRKGILDALHDGQGLGAETFERLTKIAPTQEEEAKIIQFSGNPDKLADAESFLYHILRAVPTAFIRLKALLFQSSYGCEVIQLKEHLKTLEMGCNEMKTSGLLLKFLEVILKAGNRMNAGTSRGNAHGFNLSALKKLSDVKSTDGKTSLLHFIAEQVAQFEGRQQAINQKHNLQGNIGETSKTRGPHSDNLMQQEALKEYLMLGLPVLGGLRDELCEVKKAASIEHQNFISMYSTLNAYVTEIRQIITCCGNSERDGFIKVMKRFLKECEMELKVVREEQARVMELVKKTNEYYLTGGSKDNTTNPFQLFVTVKEFVDMVDEVCIELRRKLERNNVGGEAVSTPPLSPSKKVPLRLPNFDLHFLSSMSGATSSSKSNDDF 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01358 739 PANTHER FORMIN-RELATED 6 708 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pumo4g01358 739 SMART it6_source 263 694 IPR015425 -
Pumo4g01358 739 MobiDBLite consensus disorder prediction 157 245 - -
Pumo4g01358 739 Gene3D Formin, FH2 domain 285 696 IPR042201 -
Pumo4g01358 739 SUPERFAMILY Formin homology 2 domain (FH2 domain) 195 692 - -
Pumo4g01358 739 MobiDBLite consensus disorder prediction 165 179 - -
Pumo4g01358 739 Pfam Formin Homology 2 Domain 269 679 IPR015425 -
Pumo4g01358 739 MobiDBLite consensus disorder prediction 188 212 - -
Pumo4g01358 739 ProSiteProfiles Formin homology-2 (FH2) domain profile. 263 705 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01358 Pumo-Chr4 17218855 17221185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01358 6 732 FH2 protein (formin) Gene Family AT1G70140 37.384 1.60e-140 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01358 - - gsj:114409782 897.116