Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01349 ATGGTGTCGACGTTTGAGAAGAAGAAGAACCTGAGCAAGCTCATCATCCCTTCTTCTTCTTCCTCCCCCAACCCATCCCCATCCCAATCCATCACAAGCCCCCACGTCATCCACAGTAGGTCCCACTCCTTCGTGGGCCCCTCCCCGCGCTTCAATCCTTCCTCCACCCCTCTCTTCTTCCTCGACGAGGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGGAATCAGTGGGTCCCAACCCCTCTAAGATTGGACCTTCCGATTTTCATATTCTGCGAGTTGTAGGACAGGGTTCCTTTGGGAAGGTCTTTCTTGTCAGAAAAAAGGGTGATTGTTTCGACGTTGATGGTGTCTTCGCCATGAAGGTGATGAGGAAGGACACCATCATTAAAAAAAACCACGTGGATTACATGAAAGCCGAGAGGGATATTCTCACCAAAGTCCTTCACCCTTTTATCGTTCAGCTCCGTTACTCTTTCCAGACTAAATCCAAGTTATATTTGGTGTTGGACTTCATAAATGGAGGGCATCTCTTCTTTCATTTGTATCGCCAGGGTATCTTCAGAGAGGATCAGGCAAGGCTTTACACTGCTGAGATAGTGTCTGCTGTTTCACACCTTCACAACAACGGCATCGTGCATCGAGATCTTAAACCTGAAAACATTCTTATGGATGCTGATGGGCATGTCATGCTAACTGATTTTGGACTGTCAAAAGAGATTGATGAATTGGGAAGATCCAACTCTTTGTGTGGGACTGTCGAATATATGGCTCCTGAAATCCTACTGGGTAAAGGCCATAACAAGGATGCAGATTGGTGGAGTGTTGGTATTCTCTTGTATGAAATGCTAACAGGGAAGGCACCATTTACACACAATAACAGGAAGAAACTTCAGGAGAAAATTATTAAAGAGAAAGTTAAACTTCCACCATTCCTCACCAGTGAGGCTCACTCTTTGCTCAAAGGATTGCTGCAAAAGGATCCATCGACAAGATTAGGCAGTGGGCCAAATGGAGATGACCAGATCAAAAGTCATAAATGGTTCAAGTCAATCAATTGGAAAAAATTGGAGGCAAGAGAACTGGAACCAAAGTTTAAACCAGATGTGTCTGGGAAAGACTGTACAGCTAATTTTGACCAATGTTGGACAGCAATGCCTGCTGATGACTCGCCAGCACCCACACCTACAGCAGGTGACCATTTCCAGGGCTATACTTATGTGGCACCCAACCCTTGGCTCTCATCTGGCCCACTAGACTGA 1266 0.455 MVSTFEKKKNLSKLIIPSSSSSPNPSPSQSITSPHVIHSRSHSFVGPSPRFNPSSTPLFFLDEAEEEEEEEEEEKESVGPNPSKIGPSDFHILRVVGQGSFGKVFLVRKKGDCFDVDGVFAMKVMRKDTIIKKNHVDYMKAERDILTKVLHPFIVQLRYSFQTKSKLYLVLDFINGGHLFFHLYRQGIFREDQARLYTAEIVSAVSHLHNNGIVHRDLKPENILMDADGHVMLTDFGLSKEIDELGRSNSLCGTVEYMAPEILLGKGHNKDADWWSVGILLYEMLTGKAPFTHNNRKKLQEKIIKEKVKLPPFLTSEAHSLLKGLLQKDPSTRLGSGPNGDDQIKSHKWFKSINWKKLEARELEPKFKPDVSGKDCTANFDQCWTAMPADDSPAPTPTAGDHFQGYTYVAPNPWLSSGPLD 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01349 421 SUPERFAMILY Protein kinase-like (PK-like) 88 412 IPR011009 -
Pumo4g01349 421 Gene3D Transferase(Phosphotransferase) domain 1 174 369 - -
Pumo4g01349 421 ProSiteProfiles AGC-kinase C-terminal domain profile. 351 418 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pumo4g01349 421 MobiDBLite consensus disorder prediction 61 76 - -
Pumo4g01349 421 SMART pkinase_C_6 351 410 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pumo4g01349 421 MobiDBLite consensus disorder prediction 1 86 - -
Pumo4g01349 421 FunFam Non-specific serine/threonine protein kinase 174 369 - -
Pumo4g01349 421 PANTHER RIBOSOMAL PROTEIN S6 KINASE 40 412 - -
Pumo4g01349 421 FunFam Non-specific serine/threonine protein kinase 88 196 - -
Pumo4g01349 421 ProSitePatterns Protein kinases ATP-binding region signature. 96 123 IPR017441 GO:0005524
Pumo4g01349 421 SMART serkin_6 90 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01349 421 Gene3D Phosphorylase Kinase; domain 1 88 392 - -
Pumo4g01349 421 ProSiteProfiles Protein kinase domain profile. 90 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01349 421 Pfam Protein kinase domain 90 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01349 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Pumo4g01349 421 MobiDBLite consensus disorder prediction 13 55 - -
Pumo4g01349 421 Pfam Protein kinase C terminal domain 371 408 IPR017892 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01349 Pumo-Chr4 17118364 17121794 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01349 34 411 AGC Kinase Gene Family AT3G08720 62.344 3.33e-178 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Pumo4g01349 Pkinase 1.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01349 K04688 - gmx:100798259 726.087