Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01337 ATGGACGACGGCGATCCTTGCCTGTCGGATAAAGAGGAGGAGAACGATGAGGAAGACGCTCTGTCGCGAGTTTCACTCATCGATGCTCCTATACTCTTGTTCGTCTGTTTCCACAAGGCTTTTCGCTCCGAACTCGATCACCTTCGTCGCTTGGCGGAAACGGTGTCGTTGGAGGACGAGCCACGCCGTTGCCAACAAATAGTTCTTCAGCTTCAACGCAGGTTCCAGTTTCTGAAATTTGCTCATAAGTATCATTGTGCTGCGGAAGACGAGGTTATCTTCCTTGCACTGGATACTCATATGAAAAATGTCATATGTACATATTCCCTTGAACATAACAGCACAAGTGACCTATTTGATTCTATTTTTCACTTCTTGGATGAGCTGATTGTTGCTAAAGAGAATATTTCGAAGCTGTTCCAAGAACTTGTGTACTGCATTGGCATCTTGCAAACCTCCATCTACCAACATATGCTGAAAGAAGAAGAGCAGGTTTTTCCCCTGTTGATGCAGAAATTATCTACCAAACAACAGGCTTCACTTGTGTGGCAATTCATATGTAGTGTTCCTATAATGTTGCTGGAGGAAATTTTGCCATGGATGGTATCCTTCCTTTCTGCAAACAAACAATCAGAAGTTACCCAGTGTTTAAATGAAATTGCACCAATGGAAAAAGCACTGCAAGAGGTTTTGGTTTCTTGGCTCAGAAGCAACAAACAAACCTTTTCTGAGACCTGTTTTCAGAGTGGAGATTTTCAAAGTGTTAATGGATTCCTACATATAGAAAGATCACTAGGGCTGAGTTATTGTAATAGGAACTCCGAAGAAATTTCAAGTCCAATGAAAGTGAATGGCCAAGAAATAGAAGATGGGGCCAACCAGGTTAATGTCCTTCATCTTTGGCATAATGCCATAAAGAAAGATTTGAAAGAAATTCTGAAAGAACTTTATCTACTAAGAAAATCCAGCTGTTTTCAGAATTTAGACTCAATACTTATCCAACTAAAATTCTTTGCCGATGTCCTCATCTTCTACAGCAATGCTCAGAAAAAATTCTTTCATCCTGTACTGAATAAACATGCTTATGGCTGGCTGTCCAAGTCTATTGAACAATTTCTTGGTGAAAGTAGCATTGAAGATATACAACAGTTGCTATTCTATAATTCTGAAAGTGGAATACCTTTGAGCAAATTTGTAGAGAAGCTTTGCCAAAAACTTGAATCATTTATAGCAGGAGTCAACAAACAATTTGTTTTTCAAGAAAATGAGGTATTTCCTGTCTTTAGAAAGAACTGCAGAAATGGAATGCAAGAGAGACTTCTAAGCTTGAGCCTACATATGATGCCTCTTGGGTTACTAAAGTGTGTTATAACTTGGTTTTCAGTTCGCTTGTCTGAAAAAGAGTCCAGGTCCATTCTCTATTGCATAAAGAAAGGAAACAATACTGTCTGTAAAGCTTTTTCATCACTGTTACATGAGTGGTTCCGCATTGGTTATTCAGGTAAAACCTCTATTGAAAAATTCAGACAAGACTTGCAACATATGTTCAAAAGAAGATACTCTTTTTTACCTGAACAAATTAAGGAAGCTCATGGATTTTCTTTCTTAAATTCTGAGAAGCAGCCTCATAAAATCTCTGGCAAGAGTTTGTCCTGTTCCTCCTCTTCTGGATCCAGTAATGTAAACAAGTATGAGACACCATACTCCACAGGAATTAATCTGCATATATTTTTTCCTGCCACAGTTGAGAAGTTACATCAGCATCCTGCATTACATGCAGCAGAACGTTCTTCTATTTCCTTTCTTGATGATCCGAAACCAATTGACCTAATATTTTTCTTTCACAAAGCTATCAAGAAAGATTTGGAGTACCTAGTTCTTGGCTCAGCTCAGTTAGAAAAAAATGATAAGTTGCTTATGGATTTCCAAAAACGATTCCATCTCATATATTTTCTTCATCAAATCCATAGTGATGCAGAGGATGAGATAGTGTTTCCAGCCTTGGAGGCAAGGGGTAAACTCAAAAACATTAGCCATGCCTATACCTTTGATCACAAACATGAAGTTGAGCACTTCAATAAAATATCTCGCATCCTTGATAAGATGTCCAGATTACATCTCTCTGTTTCTACAATTGATTCAAATATCAAGGAGAAGGGAATGCTAAGGTATCACCATTTATGCAGGAAGCTGCAAGAAATGTGCAAATCAATGCATAAGTCACTTTCTGATCATATAAACCGTGAGGAAATACAAATTTGGCCTATAATTAGAAAATTCTTCTCAAATCAGGAGCAAGGGAAGATCATAGGATGCATGCTTGGAAGAATAAGAGCAGAAATATTACAAGATATGATACCTTGGCTAATGGCATCTTTAACACAGGAAGAACAACATGTTTTAATGTTCTTATGGTCCATGGCTACTAAAAATACAATGTTTGATGAATGGTTAGGTGAATGGTGGGATGGGTACAGTTTAACTAAGGTAACAGAGGGGTCAAAGGATGCCCCTCTTCAGCCTGTTGAGCCACTGGAGATTATATCCAAATATTTATCTGAAGAAATTCTAAATGAGTTGCAAGAAGAATCATCTGCCAACAAAAGCATAATTTTTTGCAGAAGGATCATATTGGTGATAATGTTGAGCTGTCTAACTACAACTTTGATGATAAAGTTAAGGTTGATAATGCAGAACAAAATAATAATCAATGTCCCAAACGCACAAATCAATTTCATGATCATAACAAACATGCTTGCAATGAAGTAA 2769 0.377 MDDGDPCLSDKEEENDEEDALSRVSLIDAPILLFVCFHKAFRSELDHLRRLAETVSLEDEPRRCQQIVLQLQRRFQFLKFAHKYHCAAEDEVIFLALDTHMKNVICTYSLEHNSTSDLFDSIFHFLDELIVAKENISKLFQELVYCIGILQTSIYQHMLKEEEQVFPLLMQKLSTKQQASLVWQFICSVPIMLLEEILPWMVSFLSANKQSEVTQCLNEIAPMEKALQEVLVSWLRSNKQTFSETCFQSGDFQSVNGFLHIERSLGLSYCNRNSEEISSPMKVNGQEIEDGANQVNVLHLWHNAIKKDLKEILKELYLLRKSSCFQNLDSILIQLKFFADVLIFYSNAQKKFFHPVLNKHAYGWLSKSIEQFLGESSIEDIQQLLFYNSESGIPLSKFVEKLCQKLESFIAGVNKQFVFQENEVFPVFRKNCRNGMQERLLSLSLHMMPLGLLKCVITWFSVRLSEKESRSILYCIKKGNNTVCKAFSSLLHEWFRIGYSGKTSIEKFRQDLQHMFKRRYSFLPEQIKEAHGFSFLNSEKQPHKISGKSLSCSSSSGSSNVNKYETPYSTGINLHIFFPATVEKLHQHPALHAAERSSISFLDDPKPIDLIFFFHKAIKKDLEYLVLGSAQLEKNDKLLMDFQKRFHLIYFLHQIHSDAEDEIVFPALEARGKLKNISHAYTFDHKHEVEHFNKISRILDKMSRLHLSVSTIDSNIKEKGMLRYHHLCRKLQEMCKSMHKSLSDHINREEIQIWPIIRKFFSNQEQGKIIGCMLGRIRAEILQDMIPWLMASLTQEEQHVLMFLWSMATKNTMFDEWLGEWWDGYSLTKVTEGSKDAPLQPVEPLEIISKYLSEEILNELQEESSANKSIIFCRRIILVIMLSCLTTTLMIKLRLIMQNKIIINVPNAQINFMIITNMLAMK 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01337 922 CDD Hr-like 609 755 - -
Pumo4g01337 922 Gene3D nmb1532 protein domain like 290 442 - -
Pumo4g01337 922 Gene3D nmb1532 protein domain like 603 774 - -
Pumo4g01337 922 Gene3D nmb1532 protein domain like 29 187 - -
Pumo4g01337 922 PANTHER BLL2471 PROTEIN-RELATED 38 177 - -
Pumo4g01337 922 CDD Hr-like 37 167 - -
Pumo4g01337 922 Pfam Hemerythrin HHE cation binding domain 38 169 IPR012312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01337 Pumo-Chr4 16993792 17000566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01337 29 850 C2H2 Transcription Factor Family AT3G18290 33.520 2.79e-133 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01337 K16276 - gmx:100802706 1584.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01337 4 16993792 17000566 Pumo4g01337 4 16993792 17000566 ECH