Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01331 ATGCAGGAGAACATACCCATTGAGGAGGTTCTTGAGAATCTGAGATGTAGCAGAGAAGGGCTCAGCAGTGAAGCTGCTGAGGAGAGGCTTACCATTTTTGGTCACAACAAGCTAGAAGAGAAGAAAGAGAGCAAATTTTTGAAGTTTTTGGGATTTATGTGGAATCCTCTGTCATGGGTTATGGAGGCTGCTGCTATAATGGCAATTGCGCTTGCAAATGGAGGGGGGAAGGCTCCTGATTGGCAAGACTTTGTGGGTATTATTACCTTGCTTCTCATCAATTCAACCATCAGTTTCATTGAGGAGAACAATGCTGGTAATGCTGCAGCAGCTCTCATGGCTCGGCTTGCTCCAAAAGCAAAGGTTCTCCGAGATGGTAGGTGGAATGAGCAAGATGCTGCGGTCCTGGTTCCCGGTGACATAATCAGCATCAAACTTGGAGATATTATTCCTGCAGATTCTCGGCTTCTTGAAGGGGATCCTTTGAAAATTGATCAATCTGCACTTACAGGTGAGTCACTACCAGTGACAAAGGGTCCTGGTGATGGAGTATATTCTGGTTCTACCTGCAAACAAGGAGAGATTGAAGCTGTGGTCATCGCTACTGGTGTTCATACCTTCTTTGGGAAAGCTGCTCATCTTGTGGATACTACGAATCAAGTGGGTCACTTTCAAAAGGTCTTGACTGCAATTGGGAACTTCTGCATATGTTCAATTGCAGTGGGGATGGTTATTGAGATTATTGTTATGTATCCCATCCAAGATCGGCGCTATCGTCCTGGAATTGATAACCTCCTTGTACTTCTCATTGGAGGAATTCCAATTGCCATGCCCACAGTTTTGTCTGTGACCATGGCCATTGGTTCTCACAGGCTATCTCAGCAGGGGGCTATCACAAAGAGGATGACAGCCATTGAAGAGATGGCAGGCATGGATGTGCTTTGCAGTGATAAGACTGGGACTCTGACATTAAATAAGCTTACTGTTGACAAAAATCTTGTTGAGGTTTTTGCAAAAGGAGTGGATCCAGATACTGTTATTTTGATGGCGGCCCGAGCTTCAAGGCTTGAGAATCAAGATGCAATAGATACAGCCATAGTTGGGATGTTGGCTGATCCAAAGGAGGCACGTGCTGGTATACAAGAAGTACATTTTCTTCCTTTCAATCCTACTGATAAGCGGACAGCATTGACTTATATTGATCAAGATGGCAAAATGCATAGAGTAAGCAAAGGTGCACCGGAACAGATCCTGAATCTTGCACACAATAAGGCAGACATTGAACGTAGAGTTCATTCAGTGATAGACAAGTTTGCAGAGCGTGGTTTACGATCTCTTGCTGTAGCATACCAAGAAGTTCCAGATGGAAGGAAAGAGAGTGCTGGAGGCCCATGGCAATTTATTGGCCTTTTGTCTCTCTTTGATCCACCTAGGCATGATAGTGCAGAAACAATACGGAGGGCACTAAACCTTGGAGTAAATGTCAAAATGATTACAGGGGATCAGCTAGCTATAGGAAAGGAGACTGGTCGTCGCTTGGGAATGGGTACCAATATGTATCCTTCATCAGCTTTACTTGGGCAGGACAAGGATGAATCAATTGCTGCCTTGCCAATTGATGAACTAATAGAAAAGGCTGATGGATTTGCTGGTGTATTTCCTGAGCACAAGTATGAGATTGTGAAACGCTTGCAAGCTAGGAAACATATCTGTGGAATGACTGGTGATGGAGTGAACGATGCACCTGCCCTCAAGAAGGCAGACATTGGTATAGCTGTTGCTGATGCTACTGATGCAGCTCGTAGTGCATCTGATATTGTTCTAACAGAACCTGGCCTTAGTGTTATTATTAGTGCTGTTTTGACAAGCCGAGCTATCTTCCAGAGAATGAAAAATTATACAATGGGTCTAATTCTTTGCTGTGTTCTACAGCTTGGTTTCATGTTGCTAGCTCTTATATGGAAGTTTGACTTTCCACCCTTTATGGTGCTTATTATCGCCATTCTAAATGATGGTACTATTATGACAATTTCAAAAGATCGTGTAAAACCATCTCCTCTGCCAGATAGCTGGAAGCTAGCAGAGATATTTACTACTGGCGTTGTGCTTGGAAGTTACCTGGCAATGATGACAGTTATATTCTTTTGGGCGGCATACAAAACAAATTTTTTCCCGAGAGTGTTTGGAGTCTCGAGTCTTGAAAAAACTGCTCATGATGATTTCCGGAAACTTGCCTCTGCAATCTATCTTCAAGTGAGCACTATTAGTCAGGCACTTATATTTGTAACTCGATCTCGAGGTTGGTCATATGTTGAGCGTCCTGGTTTATTGCTGGTGGTTGCTTTTATTGTTGCTCAACTGATTGCCACTTTGATTGCAGTATATGCAAACTGGAGCTTTGCTGCAATTGAAGGAATAGGTTGGGGTTGGGCTGGTGTTATATGGTTATATAACATCATATTCTACATCCCACTTGATATCATTAAATTTTTAATTCGCTATGCTCTGAGTGGTAGGGCTTGGGACCTTGTCATTGAGCAAAGGATTGCATTCACAAGGCAAAAGGACTTTGGAAAGGAACAGCGTGAACTTCAATGGGCACATGCGCAAAGAACATTGCATGGATTACAACCACCTGACACCAAGTTCAATGAGCGTACACATGTCAATGAACTCAATCAAATGGCCGAAGAAGCTAAAAGGAGAGCTGAAATTGCAAGGTTGAGAGAACTTCATACACTAAAAGGTCATGTAGAATCAGTTGTGAGATTGAAGGGGCTTGACATAGACACAATTCAGCAAGCATACACAGTCTAA 2817 0.4313 MQENIPIEEVLENLRCSREGLSSEAAEERLTIFGHNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKAPDWQDFVGIITLLLINSTISFIEENNAGNAAAALMARLAPKAKVLRDGRWNEQDAAVLVPGDIISIKLGDIIPADSRLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMVIEIIVMYPIQDRRYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDPDTVILMAARASRLENQDAIDTAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDQDGKMHRVSKGAPEQILNLAHNKADIERRVHSVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFIGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTMGLILCCVLQLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVLGSYLAMMTVIFFWAAYKTNFFPRVFGVSSLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRGWSYVERPGLLLVVAFIVAQLIATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDIIKFLIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPDTKFNERTHVNELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01331 938 Gene3D - 312 611 IPR023214 -
Pumo4g01331 938 Coils Coil 889 909 - -
Pumo4g01331 938 FunFam Plasma membrane ATPase 467 622 - -
Pumo4g01331 938 NCBIfam plasma-membrane proton-efflux P-type ATPase 20 795 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pumo4g01331 938 CDD P-type_ATPase_H 20 830 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pumo4g01331 938 PANTHER CALCIUM-TRANSPORTING ATPASE 4 872 - -
Pumo4g01331 938 FunFam ATPase 4 plasma membrane-type 559 804 - -
Pumo4g01331 938 SUPERFAMILY Calcium ATPase, transduction domain A 118 215 IPR008250 -
Pumo4g01331 938 Pfam E1-E2 ATPase 116 294 - -
Pumo4g01331 938 Pfam haloacid dehalogenase-like hydrolase 311 588 - -
Pumo4g01331 938 SUPERFAMILY HAD-like 311 621 IPR036412 -
Pumo4g01331 938 SFLD p-type atpase 297 625 IPR044492 -
Pumo4g01331 938 SUPERFAMILY Calcium ATPase, transmembrane domain M 4 836 IPR023298 -
Pumo4g01331 938 Gene3D - 118 202 - -
Pumo4g01331 938 PRINTS H+-transporting ATPase (proton pump) signature 749 770 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo4g01331 938 PRINTS H+-transporting ATPase (proton pump) signature 431 449 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo4g01331 938 PRINTS H+-transporting ATPase (proton pump) signature 605 630 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo4g01331 938 PRINTS H+-transporting ATPase (proton pump) signature 546 562 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo4g01331 938 PRINTS H+-transporting ATPase (proton pump) signature 574 590 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo4g01331 938 FunFam Plasma membrane ATPase 327 474 - -
Pumo4g01331 938 Gene3D - 887 938 - -
Pumo4g01331 938 Gene3D - 80 804 - -
Pumo4g01331 938 Gene3D - 327 474 IPR023299 GO:0000166
Pumo4g01331 938 PRINTS P-type cation-transporting ATPase superfamily signature 165 179 - -
Pumo4g01331 938 PRINTS P-type cation-transporting ATPase superfamily signature 469 480 - -
Pumo4g01331 938 PRINTS P-type cation-transporting ATPase superfamily signature 597 609 - -
Pumo4g01331 938 PRINTS P-type cation-transporting ATPase superfamily signature 315 329 - -
Pumo4g01331 938 PRINTS P-type cation-transporting ATPase superfamily signature 491 501 - -
Pumo4g01331 938 PRINTS P-type cation-transporting ATPase superfamily signature 574 593 - -
Pumo4g01331 938 SFLD Haloacid Dehalogenase 297 625 - -
Pumo4g01331 938 ProSitePatterns E1-E2 ATPases phosphorylation site. 317 323 IPR018303 -
Pumo4g01331 938 Pfam Cation transporter/ATPase, N-terminus 4 67 IPR004014 -
Pumo4g01331 938 FunFam Plasma membrane ATPase 118 202 - -
Pumo4g01331 938 SMART Cation_ATPase_N_a_2 1 73 IPR004014 -
Pumo4g01331 938 NCBIfam HAD-IC family P-type ATPase 87 349 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo4g01331 938 NCBIfam HAD-IC family P-type ATPase 549 655 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01331 Pumo-Chr4 16885393 16891587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01331 3 938 Primary Pumps ATPases AT5G62670 92.111 0.0 1738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01331 K01535 - gmx:100819324 1727.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01331 4 16885393 16891587 Pumo4g01331 4 16885393 16891587 ECH