Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01313 ATGTTCAAGCTTTTGGTTAGTAGAGCTGCTAGGGTTTCAAATTCACTCAACCACAATGCCTTTGCTTCTTTCACTTTATCTAGGTATGCTCATTCATTACCATTTGCAACTGTAGAAGCAGAAGAGATATCAGGCTCTAGGCCTGCTGAAGTTTTGAACCTGGTGCAAGGTAAATGGGTAGGATCTTCAAATTGGAATACAATTGTGGATCCTTTAAATGGAGAGTCATTTATTAAAATTGCTGAAGTTGATGAAACAGGCATTCAGCCCTTTGTGGAAAGCTTGTCCAGCTGTCCCAAACATGGTGTACACAATCCTTTTAAGGCACCAGAGAGATATCTCATGTTTGGAGAGATATCTGCTAAGGCAGCTCACATGTTATCACTTCCCAAGGTTTTGGATTTCTTTACAAGGTTAATACAAAGAGTTTCTCCAAAGAGTTACCAGCAGGCTTTTGGGGAAGTCTATGTGACACAAAAGTTTCTAGAGAATTTTTGCGGAGATCAGGTTCGTTTCCTGGCAAGGTCTTTTGGTGTACCTGGAAATCATCTTGGACAACAAAGTCATGGTTTTCGTTGGCCATATGGTCCCGTGGCAATTATTACTCCTTTTAATTTTCCCTTAGAGATTCCTGTCCTTCAATTGATGGGTGCACTTTATATGGGCAACAAGCCAGTCCTTAAAGTTGATAGCAAGGTGAGCATTGTTATGGAACAAATGTTGCGCCTGCTTCATACCTGTGGCTTACCTGTAGAAGATGTAGACTTCATAAATTCTGATGGGAAAACAATGAACAAGCTATTACTGGAGGGAAATCCACGAATGACCCTATTTACTGGTAGTTCAAGAGTGGCAGAGAAGTTGGCTGTTGATTTAAAGGGCCGCGTTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTGGGCCCTGATGTCCATCAGGAAGATTACATAGCATGGGTCTGTGATCAGGATGCATATGCATGCAGTGGTCAGAAATGCTCGGCACAATCGTTGTTATTTATGCATGAGAACTGGTCTAAAACTTCCTTGCTATCTAAGTTGAAAGATCTTGCTGAGAGAAGAAAGCTAGAAAACTTGACAATCGGCCCAGTCCTCACGGTTACAACTGATTCAATGCTAGAACACAAGAATAAATTGCTTGAGATACCAGGATCAAAGCTGCTCTTTGGGGGTAGTCCTCTAGAGAACCATTCAATTCCGCGTATTTATGGTGCTATTAAACCAACAGCTGTCTATGTTCCTCTTGAGGAAATTATGAAGGATAAGAATTTTGAGCTTGTAACAAAAGAAATATTTGGACCCTTTCAGATTATTACGGACTACAAAAACAGTCAACTTTCAGTTGTGTTGGATGCTGTGGAAAGAATGCATAACCATTTAACAGCTGCTGTAGTTTCAAATGATCCTTTATTTTTACAGGAAGTTGTTGGCAAATCAGTAAATGGTACTACTTATGCTGGTCTAAGAGCAAGGACAACCGGAGCTCCACAGAATCATTGGTTTGGACCCGCTGGTGACGCTAGAGGTGCAGGAATTGGAACACCGGAGGCTATAAAACTTGTATGGTCTTGCCACAGAGAAATTATATATGATTTTGGGCCTGTGCCAAAGGATTGGAAAATTCCTCCATCCACTTGA 1662 0.4103 MFKLLVSRAARVSNSLNHNAFASFTLSRYAHSLPFATVEAEEISGSRPAEVLNLVQGKWVGSSNWNTIVDPLNGESFIKIAEVDETGIQPFVESLSSCPKHGVHNPFKAPERYLMFGEISAKAAHMLSLPKVLDFFTRLIQRVSPKSYQQAFGEVYVTQKFLENFCGDQVRFLARSFGVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHTCGLPVEDVDFINSDGKTMNKLLLEGNPRMTLFTGSSRVAEKLAVDLKGRVKLEDAGFDWKILGPDVHQEDYIAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSLLSKLKDLAERRKLENLTIGPVLTVTTDSMLEHKNKLLEIPGSKLLFGGSPLENHSIPRIYGAIKPTAVYVPLEEIMKDKNFELVTKEIFGPFQIITDYKNSQLSVVLDAVERMHNHLTAAVVSNDPLFLQEVVGKSVNGTTYAGLRARTTGAPQNHWFGPAGDARGAGIGTPEAIKLVWSCHREIIYDFGPVPKDWKIPPST 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01313 553 SUPERFAMILY ALDH-like 53 500 IPR016161 GO:0016491
Pumo4g01313 553 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 45 303 IPR016162 GO:0016491
Pumo4g01313 553 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 30 553 IPR044638 GO:0004029
Pumo4g01313 553 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 327 338 IPR016160 GO:0016491
Pumo4g01313 553 FunFam Aldehyde dehydrogenase 12 310 498 - -
Pumo4g01313 553 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 304 494 IPR016163 GO:0016620
Pumo4g01313 553 FunFam probable aldehyde dehydrogenase 44 302 - -
Pumo4g01313 553 Pfam Aldehyde dehydrogenase family 70 495 IPR015590 GO:0016491
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01313 1 553 Aldehyde Dehydrogenase Gene Family AT5G62530 78.957 0.0 954
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01313 K00294 - gmx:100806579 1070.84