Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01309 ATGGGGAAGTCACCAGGAAAATGGATCAAAACTGTACTGTTTGGGAAAAAGTCATCCAAATCAAATATTTCAAAAGGCAGAGAGAAGTTTGTTAATCAAAAAGAAGGAGTAGTAGTTACCTCCAAGGTGCCAGAAACTGGTTTGGCTTTAGAACCAACCTCCGACACCATTGCCAGACATGAGGAAGACCTAGAGCTGGAAAATAACGAAGCAGAAAATGTTTTGCCTGGCAATCAAGAAATGGACACAGTGGGATCTATTAATGAAGATGCTGCACTAGATCCAGAGAAAATGAAGCAGGAGGAAGCAGCAACAAAGGCACAGGCTGCTTTCAGGGGTTATTTGGCTCGGAGAGCATTTAGGGCCCTAAAAGGCATAATAAGGTTGCAAGCACTCATCCGTGGGCACTTGGTTAGGAGACAAGCTGTTGCTACATTATGCTCTATGTACGGTATTGTCAAGTTTCAAGCACTTGTTCGTGGAGGAAGAGTTAGACAGTCTAATGTTGGATCTGAAATCCATGAGAAGTGCACTATATTGAACCCTCTGGATGGCAAACTTGTCAAGCCAATTGCTATATCCACGAAAATTAGAAAGCTGTCAGCAGATGCTTTCACTCGTAAGCTTCTTACTTCGTCAACTACAATAATGGCACTGCGGTTGCAATATGTTCCTGGTGATCCAAATTCAATCCTAAGTTGGTTGGAGCGCTGGTCAGCATCTTACTTTTGGAAACCAGTTCCCCAACCCAAGAAAATTCGGGATACTAAGTCTCAGAGAAAGCATGGCAATATTTCAGTTGGAGATACTCATATGAGCAAGTCAAAACGAACCAACAGGAAGCTTCCTACTGCAAGTTTTGAGTCAGTCCCAGTGCAAGCAAATCCTGAATTTGAAAAACCAAAACGAAACATGAGGAAAATTCCAAGCCAACCCTCAGATCCTCCTGTGCAGGAAAATCCACAAAGTGAGCTTGAAAAGGTTAAACGTAACTTGAGAAAGGTTCATAACCCAGTTGTTGAGAATGCTGTTCCGTCAGAAGTTGAATCTGAGATGCCAAAGGAGCATTTGGAAAAGGCAACAGTTACCTCATGCCTTGCTGTTTCAGAACAAGAGGTCATTAGTTCTAATGAGAAGATCAAGAAGGAAGCCACATTAACCGTTTCCAGTGTGCCAGATATAGAAACTACTCCAAGACTTTCAGTTAGTAAGGAGGTGTCTGACACACCAAGCAGTTATCAAGTGTCTGTGGAATCAAAGCCCTTGACTGAGATTACAACTAAAGATAAAAACATTTCTGATGAAGTAAAAAATGAGCCCATAGATTTACCAGAGCCTATTTGTAAAGATGAAAATTCTCACTTAACAAATGGAGATTTGAGTCACAAGGAAGATCCAATAGGCAGTGAAAACCAGAAACCAAACCGAAAAGCCTCAATTGTAGCAAAGCAGGAACGTGCAGAGAATGGTATACAGAATAGTCCAACATTACCGAGTTACATGGCAGCAACTGAATCTGCAAAGGCAAAGTTGAGGGCACAAGGATCCCCAAGATTTGGACAAGATGGAAGTGAAAGAAACAACCATACCCGGCGACATTCTCTGCCATCCTCAACTAACAGCAAAATTAGTTCGCATTCACCTAGGACACAGAGACCAGTTCAATCAGGTGGCAAAGGGGGCCACAGAAGTGACAGAACTGTATCATCTTCTAGAGATGGGAATGGAAAGGTAATTCAAGCAGAGTGGAGGAGGTAA 1758 0.4238 MGKSPGKWIKTVLFGKKSSKSNISKGREKFVNQKEGVVVTSKVPETGLALEPTSDTIARHEEDLELENNEAENVLPGNQEMDTVGSINEDAALDPEKMKQEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLCSMYGIVKFQALVRGGRVRQSNVGSEIHEKCTILNPLDGKLVKPIAISTKIRKLSADAFTRKLLTSSTTIMALRLQYVPGDPNSILSWLERWSASYFWKPVPQPKKIRDTKSQRKHGNISVGDTHMSKSKRTNRKLPTASFESVPVQANPEFEKPKRNMRKIPSQPSDPPVQENPQSELEKVKRNLRKVHNPVVENAVPSEVESEMPKEHLEKATVTSCLAVSEQEVISSNEKIKKEATLTVSSVPDIETTPRLSVSKEVSDTPSSYQVSVESKPLTEITTKDKNISDEVKNEPIDLPEPICKDENSHLTNGDLSHKEDPIGSENQKPNRKASIVAKQERAENGIQNSPTLPSYMAATESAKAKLRAQGSPRFGQDGSERNNHTRRHSLPSSTNSKISSHSPRTQRPVQSGGKGGHRSDRTVSSSRDGNGKVIQAEWRR 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01309 585 MobiDBLite consensus disorder prediction 426 449 - -
Pumo4g01309 585 MobiDBLite consensus disorder prediction 455 471 - -
Pumo4g01309 585 Pfam Protein of unknown function (DUF4005) 484 564 IPR025064 -
Pumo4g01309 585 MobiDBLite consensus disorder prediction 486 501 - -
Pumo4g01309 585 ProSiteProfiles IQ motif profile. 100 128 IPR000048 GO:0005515
Pumo4g01309 585 Pfam IQ calmodulin-binding motif 124 141 IPR000048 GO:0005515
Pumo4g01309 585 Pfam IQ calmodulin-binding motif 102 121 IPR000048 GO:0005515
Pumo4g01309 585 Gene3D - 97 149 - -
Pumo4g01309 585 MobiDBLite consensus disorder prediction 426 585 - -
Pumo4g01309 585 SMART iq_5 122 143 IPR000048 GO:0005515
Pumo4g01309 585 SMART iq_5 99 121 IPR000048 GO:0005515
Pumo4g01309 585 MobiDBLite consensus disorder prediction 252 323 - -
Pumo4g01309 585 MobiDBLite consensus disorder prediction 533 554 - -
Pumo4g01309 585 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Pumo4g01309 585 PANTHER IQ-DOMAIN 5-RELATED 1 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01309 Pumo-Chr4 16682902 16690190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01309 1 585 IQD Protein Family AT1G74690 44.355 1.43e-130 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01309 - - gmx:100794636 1040.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01070 8 40659355 40664757 Pumo4g01309 4 16682902 16690190 ECH
Pumo4g01309 4 16682902 16690190 Pumo4g01309 4 16682902 16690190 ECH