Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01262 ATGGCGCTGTTCAGAAGGTTCTTCTACCGGAAGCCGCCGGATCGGCTTCTGGAGATTTCCGAGAGAGTTTATGTTTTTGATTGCTGCTTCTCCACGGATGTCTTGGAAGAAGATGAATACAGAGTTTATATGGGGGGGATTGTAGCTCAGCTACAGGATCACTTTCCAGATGCTTCTTTCATGGTATTCAACTTCCGAGAAGGGGATAGACGCAGCCAAATCTCAGACATATTTTCTCAGTATGACATGACAGTTATGGAGTACCCTCGGCAATATGAGGGTTGTCCCCTTCTGCCTTTAGAGATGATCCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGGCAACAGAATGTGCTTTTGATGCACTGTGAAAGGGGAGGTTGGCCCGTGCTGGCATTTATGCTAGCAGGTCTTCTGTTATACCGGAAACAGTACAGTGGGGAGCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCAAGAGAACTACTACACCTTTTATCTCCTTTGAATCCACAGCCTTCTCATTTAAGATATCTTCAGTATATTTCCAGGAGACATTTGGGTTCTGAGTGGCCACCATCTGAAACACCCTTATATTTGGATTGTCTGATTCTTAGAGTCCTTCCATTATTTGATGATGAAAAAGGTTGCAGGCCTGTTTTACGTGTTTATGGTCAGGACCCTTCAATTCCTGCTAATAGAAGTTCAAAGCTACTTTTTTCAACTTCAAAATCCAAAAAGCATGTTCGCCAGTACCTACAGGCAGAGTGTATGCTCGTGAAAATTGACATCCGTTGTCGTGTTCAAGGGGATGTGGTTCTTGAGTGCATACATTTAAGTGAAGATTTTGTTCGTGAGGAGATGATGTTTAGAGTAATGTTTCATACTGCATTTGTGCGGTCAAATATTTTGATGCTGAACCGTGATGAAATTGATATTTTGTGGGAGGCAAAGGACCTATTTCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTGATCTAACCACAGTCACGGTGAGTGAAGATGCAAATGAGACTGAGAGTGCTGAGACAGAAAGTGCTTCACCTGAGGAATTCTATGAAGTAGAAGAGATTTTCAGCAATGCAATTGATGCACAGGAAGGTAAGACAGAGTATGATTCTCAAGCTTTTCATGAAAATGCAGTGGATGTTGAAACTCATAAAGAGGTCTGGAGGCAAGAGTCGGATCCTCATGCTTTTGAGGATTGTACACCCGATGACAGGATTCCCAAGCAGGTTGACAAGATGGATTCTGGTATTAATGCAGTGAAAGACATCTCTATTGATGATGTGCACTATAAATTTGATGGGAGCATGGATTCAGATCCTCATGCAGTGAAGGACATTGCTGTGGATGATGGAGAAATTAAGTCAACTTCCACTGCAGTTATTCCTGATATGATGAAACCTCCTCTGGAAACAAAGGAAGTCACCATGGATGTGCACCAAGAATTAGCAGTTGTGCAAAATGAATATGATGAAGATAAGGAGGCAACAGAAAAGGAATTAGACTCCAAGGCAGGGCACCAGATGCCAGAGCCAGATTTGTCTGAACAAAAATCTGGTAAACTACTTCAATCTACTGCCAAGAAACAACCTCCATCTAACTCAAAGCCAGTTGGAGATACACTTGCAGCAAAGCCTAAGATTAAACAGCAAGATACCCATGGTTTTCAGGCAAAACAGGCTAAGCCAAATGCAGTAACTAGGTGGATTCCTTCTAACAAGGGTTCTTATACAAATTCAATGCATGTCTATTATCCACCATCAAGGAATAATAGTGCACCAGCTGCACTGACAAATTTGTCCTCCTCAAAGGAGAAAATGGAAGATGCCAAAACAAGATCTTTATCTGCTCCTGTTGTCTCTGCAGTCGTTTCTATTGACAAGACAAATGACCTAAAAAGCCGGAAGGTGGCCACTTCAAAATCTTCTGGCTATATAGCAGCAGAAATAGATGAAAAATTCCCACCATCACCATTGCCATCAATTAAAGAGACATCTTTTCAGTCAGATACTCCAGCACAACAACAAAGCTCAGAGCAAGTGCTACAGCCTCCCCCACCACCTCCCCCTCCACCTCCCCCTCCATCTCAAAGTCGAATCTCTTCACACGTTTTTGAATCTTTTTCATTAAAGGATGATGTATCAGCTCAAGACTCTCCATCTCCACTGGTATCACCATCTTCTTTGGGTGGAAAGGGGTCCATCATGGCGCCGCCGCCGCCGCCACCACCATCACCACCTTCAACTTTAACATCATTTACGAGACAACCTGCAACTTCTCTTCCTTCCCCTCCACCCCCTCCACCGCCCCCACCTCCACTCCCATTTTTTGGGCAAAATAAAGGAAGCTTCGTATCTTCCCCATCCCTTCTAGATCATAGTCTTTCTGAAGTAGGTACTGCAGTGGCACCTTTCACAGCCTCCTCCACCACCTCCAATGCCTCCTCCAAGCATGGAATTCCATCAATTCCTCCTCCTCCTCCTCCTCCTCCTCCTACCATGTTTCCTACAGCTTCAACACATAGAGCTCCACCCCCTCCTCCCCCACCACCCCCATTTGCATCACATAAAGCTTCACCTCCACCTCTATCTCTGTCTCGGCCTCCCCCTCCACCTCCCCCTCTACCACCCTTAGCTAATTCACATATATATTCAGCTACACCTCCTGTACCTCCACCGCCACCTCCCCCCCCTTTTGGTAAAGCTTCACTACCTTCATCTCCACCACCTCCACCACCACCGCCTCCTCCATTGCATAGAGCTCCACCTACACCTCCCCCCCCACCACCTCTTCCTCCGTCAAGTGGAGCCCCACCTCCACCTCCTCCATTGTCTAGAGCCCCACCTCCCCCACCACCACCTCTTCCTCCATCAAGTGGAGCCCCACCTCCACCTCCACCACCTCTTCCTCCATCAAGTGGAGCCCCACCTCCACCTCCACCTCCACCTCCTCCAATGTCAGGAGCCCCACCTCCCCCACCGCCTCCAATTCGTGGACCACCACCACCACCACCACCTCCTCCAATGCATGGAGCACCACCTCCACCTCCTCCAATGTATGGAGCACCACCTCCACCACCACCTCCTAGTGGGCGAGGACCACCTCCTCCACCTCCTCCGATGTATGGAGCACCACCTCCACCACCACCTCCTGGTGGTCGAGGACCACCTCCTCCACCTCCTCCAATGTATGGAGCACCACCTCCACCACCACCTCCTGGTTGTCGAGGACCACCTCCTCCACCTCCTCCAATGTATGGAGCACCACCTCCACCACCACCTCCTGGTGGTCGAGGACCACCTCCTCCACCTCCTCCTGGTGGTCGAGGTCCTCCTCCTCCACCTCCCCCTGGTGTTCCTGGCGCTCCTAGACCTCCTGGGGGTGGACCTCCACCACCTCCGCCCTTAGGTGCAAAAGGTGCAGTTGGAGCTGATCCAAGAGGGAGGGGACGTGGTGGGTATGCACGCCCTGCAGGAGCTGGTGCAATGGCACCCCGACGATCCTCCTTAAAGCCTTTGCATTGGAGCAAGGTTACAAGGGCACTACAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAACCGCAAATTGCACCAGAGTTTGATGTTTCAGAGCTAGAGAAGCTTTTCTCTGCAAATGTTCCAAAACCTACCGATTCTGGTGGCAAATCTGGAGGGCGGCGCAAGTCTGCTGGATCTAAAACTGACAGAATCACCTTGGTTGATCTAAGGAGGGCAAATAATACTGAAATTATGCTCACCAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTACTGGCTTTGGATGAGTCGGTATTGGATATTGATCAAGTGGAAAATCTCATTAAGTTTTGTCCAACCAAAGAGGAGATGGATCTTTTGAAGGGATACACTGGTGACAAGGAGCTTTTGGGGAAGTGTGAACAGTTTTTTTTGGAGTTGATGAAGGTGCCAAGGGTGGAGTCAAAATTAAGAGTATTTGCATTCAAGATTCAGTTTGGTTCTCAGGTTACGGAATTTAAGAAGAGTTTAAACACTGTGAACTCTGCTTGTGAAGAGGTCCGGAATTCTGTTAAACTGAAGGAGATAATGAAGAAAATTCTTTATTTGGGTAATACATTGAATCAAGGAACAGCAAGGGGATCTGCAGTTGGATTCAAGTTGGATAGTCTTTTAAAGCTCACTGACACTCGTGCTTCTAACAGTAAAATGACACTGATGCATTATCTTTGCAAGGTCCTGGCTGATAAGTCGCCTGGGCTCCTTGATTTCCACCTAGACCTTGTTAGCCTGGAAGCTTCCACTAAGATACAATTGAAGTCATTAGCAGAAGAGATGCAGGCAATCATCAAGGGATTAGAAAAGGTTAAACAAGAATTTGCTGCATCTGCAAATGATGGACCTGTCTCCGAAGTTTTCCATAAGAGATTGAAAGAATTTATAGCTGTATCTGAGTCAGAGGTAGCATCTCTAACAAACCTGTATTCTGTAGTGGGTAGAAGTGCTGATGCACTTGCACTATATTTTGGTGAGGATCCTGCTCGTTGCCCTTTTGAGCAAGTTACCACAACCCTGCTAAATTTTATAAGGTTGTTTCGGAAAGCACATGAAGAGAATATCAAACAAGCAGAGTTAGAAAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAGAAGGCCAAGGGCATTAACTTGACAAAGAAGGGTGCAAAAGATAGTTGA 4791 0.4694 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYRVYMGGIVAQLQDHFPDASFMVFNFREGDRRSQISDIFSQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPRELLHLLSPLNPQPSHLRYLQYISRRHLGSEWPPSETPLYLDCLILRVLPLFDDEKGCRPVLRVYGQDPSIPANRSSKLLFSTSKSKKHVRQYLQAECMLVKIDIRCRVQGDVVLECIHLSEDFVREEMMFRVMFHTAFVRSNILMLNRDEIDILWEAKDLFPKDFKAEVLFLDADAVIPDLTTVTVSEDANETESAETESASPEEFYEVEEIFSNAIDAQEGKTEYDSQAFHENAVDVETHKEVWRQESDPHAFEDCTPDDRIPKQVDKMDSGINAVKDISIDDVHYKFDGSMDSDPHAVKDIAVDDGEIKSTSTAVIPDMMKPPLETKEVTMDVHQELAVVQNEYDEDKEATEKELDSKAGHQMPEPDLSEQKSGKLLQSTAKKQPPSNSKPVGDTLAAKPKIKQQDTHGFQAKQAKPNAVTRWIPSNKGSYTNSMHVYYPPSRNNSAPAALTNLSSSKEKMEDAKTRSLSAPVVSAVVSIDKTNDLKSRKVATSKSSGYIAAEIDEKFPPSPLPSIKETSFQSDTPAQQQSSEQVLQPPPPPPPPPPPPSQSRISSHVFESFSLKDDVSAQDSPSPLVSPSSLGGKGSIMAPPPPPPPSPPSTLTSFTRQPATSLPSPPPPPPPPPPLPFFGQNKGSFVSSPSLLDHSLSEVGTAVAPFTASSTTSNASSKHGIPSIPPPPPPPPPTMFPTASTHRAPPPPPPPPPFASHKASPPPLSLSRPPPPPPPLPPLANSHIYSATPPVPPPPPPPPFGKASLPSSPPPPPPPPPPLHRAPPTPPPPPPLPPSSGAPPPPPPLSRAPPPPPPPLPPSSGAPPPPPPPLPPSSGAPPPPPPPPPPMSGAPPPPPPPIRGPPPPPPPPPMHGAPPPPPPMYGAPPPPPPPSGRGPPPPPPPMYGAPPPPPPPGGRGPPPPPPPMYGAPPPPPPPGCRGPPPPPPPMYGAPPPPPPPGGRGPPPPPPPGGRGPPPPPPPGVPGAPRPPGGGPPPPPPLGAKGAVGADPRGRGRGGYARPAGAGAMAPRRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDVSELEKLFSANVPKPTDSGGKSGGRRKSAGSKTDRITLVDLRRANNTEIMLTKVKMPLPDMMAAVLALDESVLDIDQVENLIKFCPTKEEMDLLKGYTGDKELLGKCEQFFLELMKVPRVESKLRVFAFKIQFGSQVTEFKKSLNTVNSACEEVRNSVKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLCKVLADKSPGLLDFHLDLVSLEASTKIQLKSLAEEMQAIIKGLEKVKQEFAASANDGPVSEVFHKRLKEFIAVSESEVASLTNLYSVVGRSADALALYFGEDPARCPFEQVTTTLLNFIRLFRKAHEENIKQAELEKKKAEKEAEMEKAKGINLTKKGAKDS 1596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01262 1596 MobiDBLite consensus disorder prediction 828 1188 - -
Pumo4g01262 1596 SMART it6_source 533 1596 IPR015425 -
Pumo4g01262 1596 MobiDBLite consensus disorder prediction 702 719 - -
Pumo4g01262 1596 MobiDBLite consensus disorder prediction 907 1160 - -
Pumo4g01262 1596 MobiDBLite consensus disorder prediction 507 594 - -
Pumo4g01262 1596 MobiDBLite consensus disorder prediction 756 771 - -
Pumo4g01262 1596 MobiDBLite consensus disorder prediction 682 701 - -
Pumo4g01262 1596 PANTHER FORMIN-J 1 793 - -
Pumo4g01262 1596 MobiDBLite consensus disorder prediction 1570 1596 - -
Pumo4g01262 1596 MobiDBLite consensus disorder prediction 539 558 - -
Pumo4g01262 1596 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Pumo4g01262 1596 Gene3D Formin, FH2 domain 1200 1594 IPR042201 -
Pumo4g01262 1596 Coils Coil 1463 1483 - -
Pumo4g01262 1596 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Pumo4g01262 1596 Coils Coil 1557 1586 - -
Pumo4g01262 1596 MobiDBLite consensus disorder prediction 507 532 - -
Pumo4g01262 1596 MobiDBLite consensus disorder prediction 1234 1258 - -
Pumo4g01262 1596 MobiDBLite consensus disorder prediction 841 900 - -
Pumo4g01262 1596 MobiDBLite consensus disorder prediction 780 798 - -
Pumo4g01262 1596 MobiDBLite consensus disorder prediction 733 749 - -
Pumo4g01262 1596 Pfam Formin Homology 2 Domain 1187 1556 IPR015425 -
Pumo4g01262 1596 Gene3D Protein tyrosine phosphatase superfamily 14 205 IPR029021 -
Pumo4g01262 1596 MobiDBLite consensus disorder prediction 574 594 - -
Pumo4g01262 1596 MobiDBLite consensus disorder prediction 609 811 - -
Pumo4g01262 1596 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Pumo4g01262 1596 MobiDBLite consensus disorder prediction 609 624 - -
Pumo4g01262 1596 Gene3D - 206 336 - -
Pumo4g01262 1596 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1181 1582 IPR015425 -
Pumo4g01262 1596 SMART PTEN_C2_2 198 338 IPR014020 -
Pumo4g01262 1596 CDD PTP_PTEN-like 16 190 - -
Pumo4g01262 1596 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1133 1576 - -
Pumo4g01262 1596 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01262 Pumo-Chr4 16124750 16145184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01262 1 642 FH2 protein (formin) Gene Family AT5G07740 63.093 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01262 - - gmx:100785475 1449.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01262 4 16124750 16145184 Pumo4g01262 4 16124750 16145184 ECH