Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01214 ATGGCAGCAAAGCTCTTGCATTCTTTAGCAGATGACAACCCAGATTTGCAAAAGCAGATAGGATGCATGACTGGGATTTTCCAACTCTTTGATCGTCACCAAATTATTCCTCCTCGCCACATTACCCAGAAGAGGCTTCCTCCAGGTAATTCCCACTTCAATTATGACAACCTGGAAAGAGGTTCTAATAGCATACACCAACGACAATCAATAGCTGATAAGAGGGGTGTGAGTGAAAAACAAAGAATTTCAACAGAATCATCAAGAACCTCATTCTCTTCTTCTTGTTCATCATCAATGTCCTCTTTGGACTATAAAGCTCAAGCAGATGCTCCCTTTGACCGGAATGGTTTTCCTGAAACTACTATGAGGGACCCAGTTATGAACCAAACAAGTTCCTCTCCCCATTTAGGATGTCAGTCCCTTGATCTAAGGGATGTGGTGAAGGACTCTATGTATAGGGAGGCCAGAGGACTATCCAAAGAAAGGGATTCCCCAAGAGATTTTCAGCTGTCCAAATCCATCAATGGAAAACAAACTCCTATTGATCTAAGGGAGTCCCTCCGAGTCCTTGCTAAACTTAGAGAAGCTCCTCGGCATTATGTTGAAGCTAAAGAACTTCCAAGATTATCGTATGAAGTAAAAGATGGACATTGGCATTCCATCTCAAAGGATGCTCCTCGGTTTTCTTATGATGGAAGAGAAACAAGTCGTACATCTTTTGAATCACATGATACCATCAAATTCCCACCTAAGCTAAAAGAGCTTCCTAGACTTTCACTGGACAGTAGGGAAGGTTCATGGCGTGCACACAGCTCTGATTCAAAACCCAGTAACCTCTCAAGAAATTTCAGTACAGGTGGTGCCTCCACCTCAGTTGACAACGTTTCTAGTCGACAACAACCGTCAGCATCCCAGAGCCGCCCACCTAGTGTTGTAGCAAAATTAATGGGCTTGGAAGCTTTGCCAGAATCCTATAAGGCCAGTGATACTAAGTCAAGTTTGAGTGAAACTGGCTCAACTCAAGGTAATGATCAGTTTTTGAAAAATGGACTCATCAAGCCACTTCGAGTTTATAATTCCCCTAAAATCTCATTGAAAGACACGACTTCCCCACGATGGAAGAATCCTGATTTGGCTGTGAAACCAATCTTAAGTTCAAGGCTTCCCATTGAACCAGCACCATGGAAGCAGCAGGATGGAAACCAAAGCTCTGAGAAACTAACTTCCCGGGCCATAAAAGCTACAGCAAGATCACCAGATTCATTTCCATCAGTTTATAGTGAGATTGAGAAGAGATTGAAGGATCTTGAATTTAAACAATCTGGAAGGGATCTCAGAGCTCTCAAACGGATACTGGAAGCAATGCAAGTAAAGGGACTGTTAGAGACCAGAAAGGAAGAACAAGCTTCAAATGTTGGAAATAAAAGAGACTATGAACTAAAGCCAAGCCTTATTCAGCATTCTATGTCAGTGAGGCAACAAACGGCCAGGGGATCTGACTCTGTAAGGGCTACAGAACCACCAATTGTGATCATGAAACCAGGAAACCTCATTGAGAAAAGTGGAATTTCTGCTTCTTCAGTCTTTCCAATTGGTGAACTCTCTGATTCCCATAAACTTCAGAGTGGTGGTGTACATGCACATGATAAAAAGGAGATAGCTTCCAAAGACCAGTCTCTTAGAAACAGTCACTGGGATGCTTCTACCAGTGTTAGTGAAAAGAAAGCAAACAGTATAAAGACTATAAAATCAGCACAATCCCAACCAAGGTCTAAACAACTTCCAAAAGAAAATGGCCCAAGTTCAGTAAAGAATTCGGGATCTGTTAGCCCGAGAATACAACAGAAGAAGTTAGAGTCGGAGAAGCAATCTCGCCTGCCTACCCCACCATCAGATTCAAATAATCCCAGAAGGCAGTTCTGGAAGCAGACAACAGAATCAGGTTCTCCTACTCGAAAACTGAGACCTAAAGTCCCTAATTCACAGTACAGTGATGACCGACTTAGTGAGACTAGCAATGAATTGAGAAGTTTAAGTAGTCAGTGGGATGAAATATCTCTGCAATCAGACAGTATCACTGTTGACTCAAAGACGGATATTGAAGTCACCAGCAGTTTACAATCTGTTGATATTATTGATAGCCAATGCCGTTCTATGAAGGCTATCGAGCATTTGGTTTCAGGATCAATGCATAAGAAATCAACTCTGAGGTGGAATGAGGATGAGTCAATTGCAGAACCTGCAACAGATGCCTCAGATCATCCAAGTCTTGATTCAGTTGATGATGTCTCAGTATACAAATATGATATGCCATCCCCAGTAAAGAGTAAATCCAATGCTCCTAAAGCTGATAATGCTCAAGAGTCTAAAGAAAATGATAATACAGATCAGTGGAACCCTGCAGATGGCGTCTTTGTTAACAACACAAGATATAGAGAGATCAACCGCGAGAAATTGCAAAGCATAGATTGCCTTATTCAAAAGCTTAGACAGCTAAACTCAAGTCATGATGAAACTAGAATAGATTACATAGCTTCCCTTTGTGAAAATACAAATCCAGACCACAGATACATTGCTGAAATACTATTAGCTTCAGGTCTACTACTGAGAGCTTTAAGTTCTGACTTGCTGACATTTCAACATCACTCATCAGGTCATCCCATTAACCCTGAGTTATTCCTTGTGTTGGAGCAGACCAAGTTAAGTAGTTTGCTTTCGAAAGAAGAAAACAGCCTCGGAAAAGTTGCTTACATGAAGGTAAACACAGAGAAGTGGCACAGGAAACTCATCTTTGATGCTGTGAATGAGATTCTTGGTGCAAAATTAGGCTCTTTTCTTGAGCCATGGTTGAAGCCTAATAGACTCACAACAAAGTTCATCAGTGCACAAAAGCTTCTTAAAGAACTTTGCTTTGAGATTCAAAAACTTCAATATGTGAAGCCAGATAGCAGTTTAGAAGATGAAGCGGATGGACTGAAAAGTATGCTATGGGAAGATGTGATGTGTCACTCAGAAAACTGGACAGGGTTCCCTGGTCAATTACCTGGGGTTGTGTTGGATGTTGAGAGACAGATATTTAAGGACTTAATTGATGAGTTTGTGATTGATGAAGTGGCTAGTTTGCAAGTTAAGTCCAGTAAGCACATGAAGCTATTTGGAAAGTAG 3168 0.4132 MAAKLLHSLADDNPDLQKQIGCMTGIFQLFDRHQIIPPRHITQKRLPPGNSHFNYDNLERGSNSIHQRQSIADKRGVSEKQRISTESSRTSFSSSCSSSMSSLDYKAQADAPFDRNGFPETTMRDPVMNQTSSSPHLGCQSLDLRDVVKDSMYREARGLSKERDSPRDFQLSKSINGKQTPIDLRESLRVLAKLREAPRHYVEAKELPRLSYEVKDGHWHSISKDAPRFSYDGRETSRTSFESHDTIKFPPKLKELPRLSLDSREGSWRAHSSDSKPSNLSRNFSTGGASTSVDNVSSRQQPSASQSRPPSVVAKLMGLEALPESYKASDTKSSLSETGSTQGNDQFLKNGLIKPLRVYNSPKISLKDTTSPRWKNPDLAVKPILSSRLPIEPAPWKQQDGNQSSEKLTSRAIKATARSPDSFPSVYSEIEKRLKDLEFKQSGRDLRALKRILEAMQVKGLLETRKEEQASNVGNKRDYELKPSLIQHSMSVRQQTARGSDSVRATEPPIVIMKPGNLIEKSGISASSVFPIGELSDSHKLQSGGVHAHDKKEIASKDQSLRNSHWDASTSVSEKKANSIKTIKSAQSQPRSKQLPKENGPSSVKNSGSVSPRIQQKKLESEKQSRLPTPPSDSNNPRRQFWKQTTESGSPTRKLRPKVPNSQYSDDRLSETSNELRSLSSQWDEISLQSDSITVDSKTDIEVTSSLQSVDIIDSQCRSMKAIEHLVSGSMHKKSTLRWNEDESIAEPATDASDHPSLDSVDDVSVYKYDMPSPVKSKSNAPKADNAQESKENDNTDQWNPADGVFVNNTRYREINREKLQSIDCLIQKLRQLNSSHDETRIDYIASLCENTNPDHRYIAEILLASGLLLRALSSDLLTFQHHSSGHPINPELFLVLEQTKLSSLLSKEENSLGKVAYMKVNTEKWHRKLIFDAVNEILGAKLGSFLEPWLKPNRLTTKFISAQKLLKELCFEIQKLQYVKPDSSLEDEADGLKSMLWEDVMCHSENWTGFPGQLPGVVLDVERQIFKDLIDEFVIDEVASLQVKSSKHMKLFGK 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01214 1055 MobiDBLite consensus disorder prediction 770 804 - -
Pumo4g01214 1055 MobiDBLite consensus disorder prediction 561 615 - -
Pumo4g01214 1055 Pfam Domain of unknown function (DUF4378) 855 1033 IPR025486 -
Pumo4g01214 1055 MobiDBLite consensus disorder prediction 539 685 - -
Pumo4g01214 1055 Pfam DUF761-associated sequence motif 298 326 IPR032795 -
Pumo4g01214 1055 MobiDBLite consensus disorder prediction 325 347 - -
Pumo4g01214 1055 MobiDBLite consensus disorder prediction 47 71 - -
Pumo4g01214 1055 PANTHER LONGIFOLIA PROTEIN 1 1051 IPR033334 GO:0051513
Pumo4g01214 1055 MobiDBLite consensus disorder prediction 265 311 - -
Pumo4g01214 1055 MobiDBLite consensus disorder prediction 272 310 - -
Pumo4g01214 1055 MobiDBLite consensus disorder prediction 543 560 - -
Pumo4g01214 1055 MobiDBLite consensus disorder prediction 83 99 - -
Pumo4g01214 1055 MobiDBLite consensus disorder prediction 327 347 - -
Pumo4g01214 1055 MobiDBLite consensus disorder prediction 40 99 - -
Pumo4g01214 1055 MobiDBLite consensus disorder prediction 625 685 - -
Pumo4g01214 1055 MobiDBLite consensus disorder prediction 223 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01214 Pumo-Chr4 15501865 15506607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01214 128 1054 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 44.845 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01214 - - gmx:100775311 1765.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01214 4 15501865 15506607 Pumo4g01214 4 15501865 15506607 ECH
Pumo4g01214 4 15501865 15506607 Pumo10g02244 10 31237186 31239217 PCT