Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01209 ATGTCTTCATCGGAACTCTGCTCTTTCTTTCTGCCGCTATCGGCGTGCTCAGCCATACTCAGTTTCGATGTTTTGCTCGGAGTTATGTTCCTAGTGGCCGTGTTCGGCTACTGGCTGGTTCCCGGTGGTCTTGCTTGGGCTTTGTCCAAGTCAAGACTGGGAAAAGCTCCGAGCAACAAACCTGCGATTCCCGGACCTTCCGGTTACCCGGTGGTGGGCCTGGTTTGGGCTTTCGTAGGGCCTCTTACTCACAGGGTCCTTGGTAAGTTGGCTGAAACCTTCGATGCCAAGCCTTTGATGGCATTCTCGTTGGGATTCAGTCGTTTCATTATCTCTTCTCAACCTGACACTGCCAAAGAGATTTTGAGCAGTTCAGCTTTCGCGGATCGTCCTGTTAAGGAATCCGCTTACGAGCTTCTCTTTCACCGTGCAATGGGGTTCGCGCCATACGGTGAGTACTGGAGGAACCTGAGGAGGATTTCCGCGACCCACATGTTCTCTCCGAAGAGAATCGCGGCCTCCGGAGGGTTCCGGGCCCAGGTTGGGGCCCAAATGGTGAGAGACGTAATGGGCCTGATGGGGAAGGAGGGTGAGGTGGAGGTGAGGAAGGTGTTGCATTTTGGGTCGTTGAATAACGTGATGAAGAGCGTGTTTGGGAGGAGTTACGTGTTTGGTGAGGGTGGTGATGGGTGTGAGCTTGAGGGGTTGGTGAGTGAGGGGTATGATTTGCTTGGGGTGTTTAACTGGAGTGACCACTTCCCACTTTTGGGTTGGTTGGATTTGCAAGGTGTGAGGAAGAGGTGTAGGAGTCTGGTGGATAGAGTGAATGTTTTTGTGGGAAAAATCATATTGGAGCACAGAATGAAGAGGGATGCTGAAGGTGAGGATAAGGCCAGGGATATTGAGAGCTCTGGCGACTTTGTTGATGTGCTCTTGGATTTGGAGAAAGAAAACAGGCTTCAACACTCTGATATGGTTGCTGTTTTGTGGGAAATGATATTTAGAGGGACAGATACAGTGGCTATCCTTTTGGAATGGATTCTAGCTAGGATGGTTCTTCATCCAGACATCCAAGCAAAAGCACAGTCTGAAATAGACTCTGTGGTTGGCTATGGCCGCTATGTGAGTGAGAATGACCTTCCCAACCTTCCCTACGTGCGTGCCATAGTGAAGGAAACCCTGAGGATGCACCCACCGGGTCCTCTTCTATCATGGGCCAGACTTTCCATTCACGACACAGAAATTGGGAACCACTTTATTCCAGCTGGCACCACTGCTATGGTTAACATGTGGGCTATCACTCACGACCAACAAGTGTGGTCTGAGCCAGAACAGTTCAAGCCAGAGCGTTTTCTGAAGGACGATGACGACGTGCCAATCATGGGGTCTGATCTTAGGTTGGCACCTTTTGGCTCTGGGAGAAGGGTGTGCCCTGGAAAAGCCATTGGCTTGGCCACTGTTGAGATTTGGCTTGCTATGTTCCTACAGAACTTAAAATGGATGCCTTGTGATTCTGGTGTGGACTTGTCTGAGTGCTTGAAACTCTCTATGGAGATGAAACACTCTCTAATCACCAAAGCTGTTGCAAGGCCTGCTGCTTCTCTTGCTTGTGTAAACCATTTTGGTTAA 1629 0.5009 MSSSELCSFFLPLSACSAILSFDVLLGVMFLVAVFGYWLVPGGLAWALSKSRLGKAPSNKPAIPGPSGYPVVGLVWAFVGPLTHRVLGKLAETFDAKPLMAFSLGFSRFIISSQPDTAKEILSSSAFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISATHMFSPKRIAASGGFRAQVGAQMVRDVMGLMGKEGEVEVRKVLHFGSLNNVMKSVFGRSYVFGEGGDGCELEGLVSEGYDLLGVFNWSDHFPLLGWLDLQGVRKRCRSLVDRVNVFVGKIILEHRMKRDAEGEDKARDIESSGDFVDVLLDLEKENRLQHSDMVAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKAQSEIDSVVGYGRYVSENDLPNLPYVRAIVKETLRMHPPGPLLSWARLSIHDTEIGNHFIPAGTTAMVNMWAITHDQQVWSEPEQFKPERFLKDDDDVPIMGSDLRLAPFGSGRRVCPGKAIGLATVEIWLAMFLQNLKWMPCDSGVDLSECLKLSMEMKHSLITKAVARPAASLACVNHFG 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01209 542 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01209 542 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01209 542 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01209 542 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01209 542 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01209 542 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01209 542 FunFam Cytochrome P450 78A5 55 530 - -
Pumo4g01209 542 Gene3D Cytochrome P450 49 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01209 542 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01209 542 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01209 542 PRINTS P450 superfamily signature 477 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01209 542 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01209 542 PANTHER CYTOCHROME P450 78A7-RELATED 20 530 - -
Pumo4g01209 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Pumo4g01209 542 Pfam Cytochrome P450 64 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01209 542 SUPERFAMILY Cytochrome P450 63 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01209 542 CDD CYP78 96 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01209 Pumo-Chr4 15408707 15410721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01209 10 530 Cytochrome P450 AT1G74110 65.160 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01209 K20619 - gmx:100811042 932.169