Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01208 ATGAATTTTACACCACATTCAATCCCAAAATCTTTAAGGAGAGAAACTATATATTATGAGATATTGGGATTGGAGAGAAGTTGCAGTGTTGAAGATGTGAAGAAAGCTTATAGGAAACTGTCTCTCAAGGTTCATCCCGATAAGAACAGAGCCCCTGGCGCCAAAGAAGCGTTCGACGCGGTGTCAAAGGCGTATCACTGTCTTAGTAATCAAAACAGTAGGAACAACAACAAGTGTATGATGCTCAACAAGGAACGTCTCGCACTCGTAGCCCTGATCCTGCTCAACAAGTGTATGAATTTGGTAATTGGTGATTCGCTTTGCACGCTTGAGTGA 336 0.4226 MNFTPHSIPKSLRRETIYYEILGLERSCSVEDVKKAYRKLSLKVHPDKNRAPGAKEAFDAVSKAYHCLSNQNSRNNNKCMMLNKERLALVALILLNKCMNLVIGDSLCTLE 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01208 111 PRINTS DnaJ domain signature 19 37 IPR001623 -
Pumo4g01208 111 PRINTS DnaJ domain signature 53 73 IPR001623 -
Pumo4g01208 111 PRINTS DnaJ domain signature 37 52 IPR001623 -
Pumo4g01208 111 SUPERFAMILY Chaperone J-domain 18 75 IPR036869 -
Pumo4g01208 111 Gene3D DnaJ domain 5 78 IPR036869 -
Pumo4g01208 111 ProSiteProfiles dnaJ domain profile. 17 73 IPR001623 -
Pumo4g01208 111 CDD DnaJ 18 70 IPR001623 -
Pumo4g01208 111 PANTHER AT29763P-RELATED 9 75 - -
Pumo4g01208 111 Pfam DnaJ domain 18 75 IPR001623 -
Pumo4g01208 111 SMART dnaj_3 16 73 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01208 Pumo-Chr4 15397179 15397632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01208 7 75 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.486 6.27e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01208 K09518 - pop:7484682 107.071