Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01207 ATGGTGTCTCTGTGGTTATCAACCGCTGGATCTGTTGTCCCCCATGGTGGCTTCTTGGCCACCTTACTGCTGTCACTGTTCTTGTGCACTACATTCACTTCTACAGAAGCCTATGATGCACTTGATCCAACTGGCAATATTACAATCAAATGGGATATCATAAGCTGGACTCCAGACGGCTATATTGCTGTTGTTACAATGTACAACTTTCAACGGTATCGGCATATTCAGGCTCCTGGATGGATACTAGGGTGGACATGGGCAAAAAAGGAAGTAATTTGGAATGTAATGGGAGGCCAAACCACAGAGCAAGGGGACTGTTCAAGGTTCAAAGGGAACATCCCTCATTGTTGTAAGAAGGACCCAACAGTAGTGGATTTGCTGCCTGGAACTCCTTACAACCAGCAGATTGCAAATTGTTGCTCAGGGGGAGTCTTGACCTCATGGGCCCAGGACCCTGAAAATTCAATAACTTCATTTCAACTTAGTGTTGGTTCAGCAGGAACAACTAACAAAACTGTCAAACTGCCAAAAAATTTTACCCTCAAAGCACCAGGGCCTGGTTATACTTGTGGCCCTGCCAAGATTGTGAAACCAACTAAATTTATTACCAAAGACAAGAGGAGAACCACTCAGGCATTGATGACCTGGAATGTTACCTGCACATATTCTCAATTCCTGGCTCAGAAGACCCCAACTTGCTGTGTATCTCTCTCATCCTTCTATAACAATACAGTAGTAAACTGCCCTACCTGCACCTGTGGTTGCCAAAACAAAACAGAACCTGGCAGCTGTGTAGATCCTAATTCCCCGCATTTAGCTTCAGTTGTGTCACCACCAGGCAAAGCTATAAATACACCTCTGGTCCGGTGCACCAATCACATGTGTCCTATTCGAGTGCATTGGCACGTGAAGCTTCAATATAAAGAGTACTGGAGGGTCAAGATCACAATCACAAATTTCAATTACAGAATGAACTATTCACAATGGAACCTTGTTGTGCAGCACCCAAACTTTGATAATGTAACCCAGGTTTTCAGCTTTAATTTCAAGCCGCTAACACCTTATGTGGGCTTAAATGATACTGGTATGCTGTGGGGAGTCAAGTTCTACAATGATTTACTCACTTCAGCAGGACCCCTTGGGAATGTGCAGTCTGAGCTCTTATTCCGAAAGGACAAATCAACCTTCACATTTGATAAGGGATGGGCTTTTCCGCGAAGAATTTATTTCAATGGAGATAACTGTGTAATGCCACCTCCGGATGCCTATCCATGGCTGCCAAATGCAAGTTCAAAACTAGTTTTCTCTTTACTAAGTACACTCCTAGGCACTTTAGCTTGTGTGGCAATCTTATTGACTTAA 1365 0.4374 MVSLWLSTAGSVVPHGGFLATLLLSLFLCTTFTSTEAYDALDPTGNITIKWDIISWTPDGYIAVVTMYNFQRYRHIQAPGWILGWTWAKKEVIWNVMGGQTTEQGDCSRFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCSGGVLTSWAQDPENSITSFQLSVGSAGTTNKTVKLPKNFTLKAPGPGYTCGPAKIVKPTKFITKDKRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTVVNCPTCTCGCQNKTEPGSCVDPNSPHLASVVSPPGKAINTPLVRCTNHMCPIRVHWHVKLQYKEYWRVKITITNFNYRMNYSQWNLVVQHPNFDNVTQVFSFNFKPLTPYVGLNDTGMLWGVKFYNDLLTSAGPLGNVQSELLFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSKLVFSLLSTLLGTLACVAILLT 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01207 454 PANTHER PROTEIN COBRA 26 440 IPR006918 GO:0010215|GO:0016020
Pumo4g01207 454 Pfam COBRA-like protein 61 224 IPR006918 GO:0010215|GO:0016020
Pumo4g01207 454 PIRSF COBRA 11 454 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01207 Pumo-Chr4 15385752 15389493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01207 2 442 COBRA Gene Family AT3G02210 72.912 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01207 - - gmx:100811581 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01207 4 15385752 15389493 Pumo4g01207 4 15385752 15389493 ECH