Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01162 ATGGCTGGGGGGAGAAGGAGGAGGCACCACTTCAGCAGAATCCATGCATTCACGTGTGGGAAAGCTTCTTTGAAAGAGGAGCATTCACTAATAGGAGGCCCTGGCTTCTCAAGGAAAGTCTATTGCAATGACCCTGAACGTGCCACAGCGAGTCTTCTCAATTATGGTGACAATTATGTCAGAACAACTAAGTATACATTGGCCACGTTCCTCCCCAAGTCCTTGTTTGAGCAATTCAGGAGGGTTGCAAATTTCTACTTCCTCGTTTGTGCAGTTTTGTCTTTCTTTCCGGTGTCTCCTTACTCAGGTGTCAGTAATGTTGTCCCTCTACTGGTTGTGGTTGCTGCCACAATGGCCAAAGAGTTCATTGAGGATTTTAGGAGGAAACAACAGGATATAGAGATGAATAACAGAAAAGTTAAACTGCATCGTGGAGGTGGTGTTTTTGACTATTCTAAATGGAGGGATTTGAAAGTTGGAGATGTAGTGAGGGTGGAAAAAGATGAATTTTTTCCTGCTGATCTCATCTTACTTGCATCAAACTATGATGATGCAATTTGCTATGTTGAGACCATGAATCTTGATGGAGAGACAAATCTGAAACTGAAACAAGCACCGGAAGGAACTTCAAAGTTGCAAGAAGACTTGAACTTTCAAAATTTCAGGGCTGTCGTCAAATGTGAAGATCCAAATGCAAATCTGTACACATTTGTTGGTAGTATGGAGCTTGAGGATCAACAGTATCCTCTTGCACCTCAACAGCTACTGCTTAGGGACTCTAAGCTGAGGAACACAGATTTTGTTTATGGTGTGGTAATCTTTACTGGACATGATACAAAGGTTATGCAGAATGCAACAGATCCTCCATCCAAGAGAAGCAAAATTGAGAGAAGGATGGATAAGATTATCTACTGCCTCTTCTTTGTACTTATTTTGATTTCTTTCATTGGGTCCATATTCTTTGGGATTGCAACAAATGATGACCTTGAAAATGGAAAAATGAAGAGATGGTACCTTAGACCAGATGAAACCAAAATTTACTATGACCCAAATGAACCAGTAGCTGCAGCAATTCTGCATTTCTTCACAGCACTTATGTTGTATAGTTACTTGATTCCAATTTCCTTATATGTATCTATTGAAATTGTAAAGGTTCTTCAAAGCATTTTCATCAACCAGGATGTGCACATGTATTATGCGGAAACTGACAAGCCAGCACATGCTCGTACATCAAATTTGAACGAAGAACTTGGCCAAGTTGATACCATACTTTCAGATAAGACGGGAACTTTGACTTGCAATTCTATGGAATTTATCAAGTGTTCTATTGCTGGGGTTGCTTATGGACGAGGAGTTACAGAAGTTGAGAGAGCTCTATCTAGGAGACAAGAATCACATTCAGGTCAAGAGTTGAAAAAAAATGGTGAATCAAAGTCATCCATTAAAGGGTTTAACTTTATGGATGAAAGGATCATGAATGGCAATTGGATCAAAGAACCCAATGCCAATGTAATCCAGTACTTCCTACGGTTGCTGGCTGTATGCCATACTGCAATACCTGAAGTTGATGAACAAACTGGTAAGGTTTCATATGAAGCTGAATCACCAGATGAGGCAGCTTTTGTGATTGCAGCCAGGGAACTTGGATTTGAATTTTATGAAAGGACACATACAACTATTTCACTGCGTGAATTAGACCCCATATCAGGCCAGAAAATTGACAGGTCCTACAAACTTTTGAATATATTAGAGTTTAGTAGTGCAAGAAAGCGGATGTCTGTAATTGTGAGAGATGCGGAGGGGAAACTATTACTACTTAGCAAAGGCGCTGACAGTGTAATGTTTGAACGAATTGCAAAGAAAGGAAGGGATTTTGAAGAGAAGACAAAGCAGCACGTTAGTGAATATGCGGATTCTGGTTTGAGGACCTTGATACTTGCATATCGTGAACTTAATGAGGAAGAGTACAATCAATTTAATAAAGAGTTTACAGAGGCCAAGAACTTAGTGGGTGCAGACCAGGAGCAGATTGTTGAGGGAATAATACAAAATATTGAGAAGGATTTAATTCTTCTTGGTGCTACTGCAGTTGAAGACAAACTACAAGATGGGGTTCCTGAATGCATTGACAAGCTAGCACAGGCCGGGATTAAGCTATGGGTTTTAACCGGTGATAAAATGGAGACAGCAATTAATATTGGATTTGCTTGTAGTTTACTCAGACAAGGAATGAAACAAATTATAATTAGCTCAGATACTCCAGAAAACAAATCATTGGAGAAAATGGAGGACAAGTCTGCTGCTGAAGCGGCAATTAAGTCAAGTGTTCTTCGTCAACTAAGGGAGGCAAAGGCATTACTTTCTACATCAGATGAAAACTATGAGGCCTTGGCCCTGATCATTGATGGGAAGTCTCTTACTTATGCACTAGAAGATGATGTAAAGGACTTGTTTCTTGAACTTGCCATTGGTTGTGCATCTGTTATCTGCTGTCGTTCATCTCCCAAGCAGAAAGCACTTGTTACAAGACTGGTGAAGATGAGAACTGGTAGTACAACACTAGCTATTGGAGATGGGGCAAATGATGTTGGAATGCTCCAAGAAGCAGACATTGGAATTGGTATCAGTGGTGTGGAGGGAATGCAGGCAGTTATGTCAAGTGATATTGCAATAGCCCAATTTCGGTTTCTAGAGCGCTTACTTCTTGTGCATGGACATTGGTGTTACAGAAGGATCTCATCAATGATCTGCTACTTCTTTTACAAGAATATTGCCTTCGGCTTCACTCTGTTCTTCTTTGAGATGTATGCCTCATTCTCAGGGCAAGCTGCATACAATGATTGGTTCTTGTCACTATACAATGTATTCTTCACTTCACTTCCTGTAATTGCATTGGGAGTATTTGATCAGGATGTCTCTTCTAAATTATGTTTCAAGTTTCCATTATTATATCAAGAAGGCATCCAAAACATCCTATTTAGCTGGAAACGAATCATCGGTTGGGCATTGAATGGAGTTGTGACTTCTGCCATCGTTTTCTTCTTTTGCATCCGTAGTATGGAACATCAGGCATTCCGCAAAGGTGGTGAAGTCGTGGGACTGGAAGTTCTTGGTGCCACCATGTACACCTGTGTTGTGTGGGTGGTGAATTGCCAAATGGCATTATCTATCAGTTACTTCACTTACATACAACATATATTCATCTGGGGAAGCATTCTATTCTGGTATATATTCCTCATGGCATATGGAGCCATAAACCCTTCCTTCTCAACCACAGCCTATAAGGTCTTCATTGAAGCTCTTGCACCAGCCCCATCTTTCTGGTTCATCACTTTGCTCATTCTTATTGCTTCCCTCCTTCCATATTTCATCTATGCTTCCGTCCAAATGCGTTTCTTCCCCATGTATCATCAAATGATTCAGTGGATGAGAAACGACAGGCATACAAGTGATCCAGAATACTGTAATGTGGTAAGGCAGCGATCAATAAGACACACAACAGTTGGATTCACAGCTCGTTTGGAAGCATCCAAACGTTTTGAAGCATCCAGAAGAGTTGAAGGATCCAACCATTTTGAAGCATCCAAAAGACTTGAAGGATCCAAAAGACTTGAAGCATCCAAACGTTCTGAAGGGAAGTCTGAGGACAGATAA 3654 0.4064 MAGGRRRRHHFSRIHAFTCGKASLKEEHSLIGGPGFSRKVYCNDPERATASLLNYGDNYVRTTKYTLATFLPKSLFEQFRRVANFYFLVCAVLSFFPVSPYSGVSNVVPLLVVVAATMAKEFIEDFRRKQQDIEMNNRKVKLHRGGGVFDYSKWRDLKVGDVVRVEKDEFFPADLILLASNYDDAICYVETMNLDGETNLKLKQAPEGTSKLQEDLNFQNFRAVVKCEDPNANLYTFVGSMELEDQQYPLAPQQLLLRDSKLRNTDFVYGVVIFTGHDTKVMQNATDPPSKRSKIERRMDKIIYCLFFVLILISFIGSIFFGIATNDDLENGKMKRWYLRPDETKIYYDPNEPVAAAILHFFTALMLYSYLIPISLYVSIEIVKVLQSIFINQDVHMYYAETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERALSRRQESHSGQELKKNGESKSSIKGFNFMDERIMNGNWIKEPNANVIQYFLRLLAVCHTAIPEVDEQTGKVSYEAESPDEAAFVIAARELGFEFYERTHTTISLRELDPISGQKIDRSYKLLNILEFSSARKRMSVIVRDAEGKLLLLSKGADSVMFERIAKKGRDFEEKTKQHVSEYADSGLRTLILAYRELNEEEYNQFNKEFTEAKNLVGADQEQIVEGIIQNIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTPENKSLEKMEDKSAAEAAIKSSVLRQLREAKALLSTSDENYEALALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKMRTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEMYASFSGQAAYNDWFLSLYNVFFTSLPVIALGVFDQDVSSKLCFKFPLLYQEGIQNILFSWKRIIGWALNGVVTSAIVFFFCIRSMEHQAFRKGGEVVGLEVLGATMYTCVVWVVNCQMALSISYFTYIQHIFIWGSILFWYIFLMAYGAINPSFSTTAYKVFIEALAPAPSFWFITLLILIASLLPYFIYASVQMRFFPMYHQMIQWMRNDRHTSDPEYCNVVRQRSIRHTTVGFTARLEASKRFEASRRVEGSNHFEASKRLEGSKRLEASKRSEGKSEDR 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01162 1217 Gene3D - 688 896 IPR023214 -
Pumo4g01162 1217 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 33 1148 - -
Pumo4g01162 1217 NCBIfam HAD-IC family P-type ATPase 822 939 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo4g01162 1217 SFLD Haloacid Dehalogenase 406 907 - -
Pumo4g01162 1217 Pfam Cation transport ATPase (P-type) 524 617 - -
Pumo4g01162 1217 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Pumo4g01162 1217 SFLD p-type atpase 406 907 IPR044492 -
Pumo4g01162 1217 CDD P-type_ATPase_APLT_Dnf-like 57 1016 - -
Pumo4g01162 1217 SUPERFAMILY Calcium ATPase, transduction domain A 139 285 IPR008250 -
Pumo4g01162 1217 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Pumo4g01162 1217 PRINTS P-type cation-transporting ATPase superfamily signature 742 752 - -
Pumo4g01162 1217 PRINTS P-type cation-transporting ATPase superfamily signature 856 875 - -
Pumo4g01162 1217 SUPERFAMILY HAD-like 419 911 IPR036412 -
Pumo4g01162 1217 Gene3D - 115 286 - -
Pumo4g01162 1217 FunFam Phospholipid-transporting ATPase 116 286 - -
Pumo4g01162 1217 FunFam Phospholipid-transporting ATPase 534 692 - -
Pumo4g01162 1217 Pfam Phospholipid-translocating P-type ATPase C-terminal 884 1134 IPR032630 -
Pumo4g01162 1217 Gene3D - 560 671 IPR023299 GO:0000166
Pumo4g01162 1217 MobiDBLite consensus disorder prediction 1184 1217 - -
Pumo4g01162 1217 NCBIfam phospholipid-translocating P-type ATPase 55 1141 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pumo4g01162 1217 FunFam Phospholipid-transporting ATPase 692 896 - -
Pumo4g01162 1217 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Pumo4g01162 1217 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 483 693 IPR023299 GO:0000166
Pumo4g01162 1217 SUPERFAMILY Calcium ATPase, transmembrane domain M 45 1134 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01162 Pumo-Chr4 14886007 14892390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01162 10 1182 Primary Pumps ATPases AT3G25610 70.279 0.0 1775
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01162 K01530 - gmx:100799312 2273.43