Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01155 ATGGCTATAAGGTTTTTATCATGCAAGTGCCACTATGTTCTTTGTTTTCTGTTCCTCGTTTTGTCTTGTCTTTGTAAGGGCCAAGACCAAGACTCTTCATGGTCACCAATGAAGAGCAAAGAGAAGGAAGTCATCTACTCTGTTATTCAAGGGTTTGTTGGAAAGTGGTGGAACGGTTCATATCTTTATCCAGATCCTTGTGGTTGGACTCCTATACAGGGAGTTTCCTGTGAGCAATATGATGATGGCTTCTGGTATGTAACCACTGTAAACTTTGGACCAGTTTTTGACAACTCTCTCATGTGCAGCCATGATGCTCAATTCCCTCAACAACTATTCAATCTCAAGCACCTAAAAGTCCTCTCATTGTCCAGTTGCTTCCTTTCTCCTACCAAAAATCCTGTTAAACTCTCTCTTTCAAACTGGGACAAGTTCTCACACAGTTTGGAATCTTTAACACTTAGATCAAACCCTGGTCTTGTTGGTACTATTCCATCAGCAATTGGCAGCCTTAGGAAGCTTCAATCTCTGGTAGTGCTAGAAAATGGGCTAACAGGTGAACTGCCACTAAGTATTGGTAATTTGGTCAGTTTGAGGCAACTAGTCCTTGCAGGAAACTATTTGGTGGGTGAGGTTCCAGCCAACTATGGAGGGCTTTCTGAGCTTTTAATATTTGATGCAAGCAGGAATAATCTATCAGGAGTTTTGCCATCAACACTTGGACTTTTGGATTCACTTCTAAAGCTTGATTTGAGTAACAACATGTTTGAGGGAGAGTTGCCAAGGGAGCTAGGAGGGCTAAAGAATCTAACCTTACTTGATATAAGTCATAACAAACTTAGAGGTGGGTTGGTTAGGACAATCAAAGAGCTTGTTTCCTTAAAGCATTTGGTTCTGTCCAACAACCCTATAGGGGGTGATCTCTTGGGAGTTAAGTGGGAAAATTTCCAAAACATAGAAGCATTGGACCTTTCTAACATAGGTTTGGAAGGGAGTGTCCCAGAGTCCATGGCAAAAATGAAAAGGCTTAGATTTCTGGACCTCAGCAACAACAATCTTTGTGGAACTCTCTCTAGAAGTTTGGAAAAACTGCCATGTCTTAGAGCTCTTCATGTAAATGGAAATAACTTGACAGGGAGACTTGACTTCTCAGAGAGGTTTTACATGGAAATGGCAATGCGTTTTGCAGCTTGGAATAATGCAAATCTCTGTTACATTGCCAAACCAACGCACCAAATGCCTTATGGAGTAAAACCTTGTGTGCAGAACATTACTATTCCTGAAGGGGTTTCAACTGTTAAGATAAGTGAAGCGAATTACGAGGATTCCTTTGTAGTGGCCTCTTTTGGAGGTCTCCTTTTAAGTCCAACACTCAAACGTAACCAACCCCATCATCTCTCAAAACACACTTCCACTCTTTGGCAGCAAGAAAAGCACACACTACACTATCTAGAAATCCAAATATGGCTGATTCCCTTCAAAGCCTCATACCCACTTTTCCTTTGCTTAATTCTTTGCTGTGGCGTCTCCCTTGTCAATTGCACTGAGTTTGAAGTTGGAGGTCACGATGGTTGGGTTGTCCCCAAGTCAAAGGACGATGATCAAATGTACAATCAGTGGGCATCCCAAAACAGATTCAAAGTTAATGACACTCTTCTCTTCAAGTACGAGAAGGACTCGGTTATGGTGGTGACTGAAGAAGAGTATGAAAACTGTAAAGCCTCTCGTCCCCTCTTTTTCTCTAACAATGGTGACACAGTCTTCAAGTTTGACCGGCCAGGCTTGTTCTACTTCATTAGTGGGGTGAGTGGTCACTGTGACAGAGGCCAGAAGATGATCATCAAGGTTTTGGATGTGGAGCCAACACCCCCACCCCAATCTGCAAATGACAATGCACAAAAACCACCACCTCCTAAAAAAAGTGGAGTTGCTGAAATGACTCGTATGAGTATAATAACAACATCCACACTTTTTGTTATGTCAACCTTCGTACTGCAGCTTTATGCTTGA 2010 0.4209 MAIRFLSCKCHYVLCFLFLVLSCLCKGQDQDSSWSPMKSKEKEVIYSVIQGFVGKWWNGSYLYPDPCGWTPIQGVSCEQYDDGFWYVTTVNFGPVFDNSLMCSHDAQFPQQLFNLKHLKVLSLSSCFLSPTKNPVKLSLSNWDKFSHSLESLTLRSNPGLVGTIPSAIGSLRKLQSLVVLENGLTGELPLSIGNLVSLRQLVLAGNYLVGEVPANYGGLSELLIFDASRNNLSGVLPSTLGLLDSLLKLDLSNNMFEGELPRELGGLKNLTLLDISHNKLRGGLVRTIKELVSLKHLVLSNNPIGGDLLGVKWENFQNIEALDLSNIGLEGSVPESMAKMKRLRFLDLSNNNLCGTLSRSLEKLPCLRALHVNGNNLTGRLDFSERFYMEMAMRFAAWNNANLCYIAKPTHQMPYGVKPCVQNITIPEGVSTVKISEANYEDSFVVASFGGLLLSPTLKRNQPHHLSKHTSTLWQQEKHTLHYLEIQIWLIPFKASYPLFLCLILCCGVSLVNCTEFEVGGHDGWVVPKSKDDDQMYNQWASQNRFKVNDTLLFKYEKDSVMVVTEEEYENCKASRPLFFSNNGDTVFKFDRPGLFYFISGVSGHCDRGQKMIIKVLDVEPTPPPQSANDNAQKPPPPKKSGVAEMTRMSIITTSTLFVMSTFVLQLYA 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01155 669 FunFam Piriformospora indica-insensitive protein 2 310 412 - -
Pumo4g01155 669 Gene3D Ribonuclease Inhibitor 40 212 IPR032675 -
Pumo4g01155 669 Pfam Leucine Rich Repeat 342 364 IPR001611 GO:0005515
Pumo4g01155 669 SUPERFAMILY L domain-like 48 382 - -
Pumo4g01155 669 SUPERFAMILY Cupredoxins 514 617 IPR008972 -
Pumo4g01155 669 ProSiteProfiles Phytocyanin domain profile. 515 618 IPR003245 GO:0009055
Pumo4g01155 669 FunFam Early nodulin-like protein 1 514 621 - -
Pumo4g01155 669 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 109 486 - -
Pumo4g01155 669 Gene3D - 514 620 IPR008972 -
Pumo4g01155 669 Gene3D Ribonuclease Inhibitor 310 392 IPR032675 -
Pumo4g01155 669 Gene3D Ribonuclease Inhibitor 213 309 IPR032675 -
Pumo4g01155 669 Pfam Plastocyanin-like domain 533 610 IPR003245 GO:0009055
Pumo4g01155 669 MobiDBLite consensus disorder prediction 620 643 - -
Pumo4g01155 669 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Pumo4g01155 669 FunFam Piriformospora indica-insensitive protein 2 213 309 - -
Pumo4g01155 669 FunFam Piriformospora indica-insensitive protein 2 40 212 - -
Pumo4g01155 669 CDD OsENODL1_like 515 617 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01155 Pumo-Chr4 14824087 14827766 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01155 499 665 Phytocyanin Superfamily AT1G48940 50.296 1.14e-53 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01155 - - gmx:100799407 790.801