Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01148 ATGGATGCACCACGTGTCTCTCGGACCGTCGCTGACCCCAAAATCCGCCGCGTGGGTTTCTTCGCTTCAGATTCTTCTGCCACCGATTCCCTCATGATTCTGTCGCCACGTCATCTCTCCGTGACTGTCCCGGAGACGCAGCCTTCCGGCGATTGCCACGTGGCATCCGGGAGCTACGATCCCTCGGAAAACCACCCAAACCTCGCTACTGGCATTGAAAAGAGGGAAGAGGAAGAGAAAGAGGTTCGGCAATCGAGTTTAAAGCCGTTGAAAGCAAAATCTACCAAGGCTGAGAGACGAGCCTTGCAGGAGGCACAGAGAGCTGCTAAAGCTGCTTCTAAAGCTGAGGTAAGCAAAGCAGTTGCCGAATCTGGTCGAGCCACCCCTAGTAAAAGTACAAAGCAATCTTCACAAAAGAAAGGTGGTCTTTCCTGTGCGTCTCCAGTGACCACTGATAAGAAAGCAGGAGATCGTCCTTTGGACAAAGATAGGAAAAAGGATGCTCCTTCTCCGCGAATGCAATTTGATGACGAAAGCCGAATGGAAAAGGCTAGAAGACGTGCAGTAGTCAATCCAACTGAATCTAGAAACAAAGTTGAATTGTTTCTGCATTTGCCTCAATATGAACATGGAACTCAGCTTCCTAATCTTGAATCGAAGTTTTTCCAAATTGATTCATTGCACCCTGCAGTATTTGAGGTTGGACTGCGTTATTCAGCAGGAGGTATATCAGGGGGTAATGCTCGTTGTATTGCAATGCTAAGAGCATTTCAAGATGCCATTAGAGATTACTGCACACCACATGAAAAAGTCCTTGTTAGGGATTTAGCTTCAAAAATCAATAGTTATGTATCTTTCTTTACTGAATGTAGACCACTTTCTATGAGCATGGGAAATGCAATTAGGTTTGTAAAGAGTCGTATTGTCAAACTGACTTTAAATCATTCTGAGTTTGAGGCAAAAGCAACCCTGTGTTCTGATATTGACCGGTTCATAAATGAAAAAATAATTCTTGCCGATAAGGTGATTGTCCGACATGCTTTTACAAAGGTTAAGGATGGGGATGTTCTTCTCACATATGGATTGTCATGTGTTGTTGAGATGATTCTTTTATATGCCCATGAGCTGGGAAAAAAGTTCCGTGTTGTGGTGGTAGATTCACGGCCAAGGCTTGAAGGTCAGGCCTTACTTCGTAGGCTAGTGGCTAAGGGCCTGAGTTGCACATATACTCATATAAATGCTGTTTCTTATATCATGCGTGAGGTCACACGGGTTCTTCTGGGAGCTTCTGCGGTTTTGTCTAATGGAACTGTATATTCAAGGGTTGGGACTTCTTGTGTTGCAATGGTGGCTCATGCATTTCATGTTCCTGTATTGATCTGTTGTGAAGCATATAAATTTCATGAAAGGGTGCTACTGGATTCAATATGTTCTAACGAACTAGGTGACCCAGATGCCATTGCCAGGGTTCCTGGACGAAAGGATGTCAATTATCTGGACAATTGGGCCAGTGAAGACAATTTGAGGCTTTTGAATTTGATGTATGATGCTACTCCTTCAGATTATGTCTCGGTTATTGTGACAGATTATGGCATGCTCCCTCCTACAAGCGTGCCTGTAATAGTACGTGAATATCGACGAGAGCATTTGTTGATGTAG 1659 0.4424 MDAPRVSRTVADPKIRRVGFFASDSSATDSLMILSPRHLSVTVPETQPSGDCHVASGSYDPSENHPNLATGIEKREEEEKEVRQSSLKPLKAKSTKAERRALQEAQRAAKAASKAEVSKAVAESGRATPSKSTKQSSQKKGGLSCASPVTTDKKAGDRPLDKDRKKDAPSPRMQFDDESRMEKARRRAVVNPTESRNKVELFLHLPQYEHGTQLPNLESKFFQIDSLHPAVFEVGLRYSAGGISGGNARCIAMLRAFQDAIRDYCTPHEKVLVRDLASKINSYVSFFTECRPLSMSMGNAIRFVKSRIVKLTLNHSEFEAKATLCSDIDRFINEKIILADKVIVRHAFTKVKDGDVLLTYGLSCVVEMILLYAHELGKKFRVVVVDSRPRLEGQALLRRLVAKGLSCTYTHINAVSYIMREVTRVLLGASAVLSNGTVYSRVGTSCVAMVAHAFHVPVLICCEAYKFHERVLLDSICSNELGDPDAIARVPGRKDVNYLDNWASEDNLRLLNLMYDATPSDYVSVIVTDYGMLPPTSVPVIVREYRREHLLM 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01148 552 Pfam Initiation factor 2 subunit family 243 535 IPR000649 GO:0044237
Pumo4g01148 552 SUPERFAMILY NagB/RpiA/CoA transferase-like 238 545 IPR037171 -
Pumo4g01148 552 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 72 549 - -
Pumo4g01148 552 MobiDBLite consensus disorder prediction 69 105 - -
Pumo4g01148 552 MobiDBLite consensus disorder prediction 154 191 - -
Pumo4g01148 552 Gene3D - 339 545 IPR042529 -
Pumo4g01148 552 MobiDBLite consensus disorder prediction 42 191 - -
Pumo4g01148 552 MobiDBLite consensus disorder prediction 125 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01148 Pumo-Chr4 14744593 14748958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01148 81 552 Eukaryotic Initiation Factors Gene Family AT5G38640 67.568 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01148 K03680 - gmx:100795256 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01148 4 14744593 14748958 Pumo4g01148 4 14744593 14748958 ECH