Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01107 ATGGAGGACCTCTTCTCCTCCCTCAAGCTTCTCTCTCTCTCCTTCATGCTCCTTCTCTTCCTCCTCAAGCTCACTGTCCTCCTCTGGTGGCGACCCAGAAAAATTGAAGGCCATTTCTCCAAGCAAGGGATCAGAGGCCCCCCTTATCGTTTCTTCATTGGAAACGTTAAGGAACTTGTCGGCATGATGTTGAAGGCCTCATCTCAACCCATGCCTTTCTCCCACAACATTCTCCCCAGAGTCCTTTCCTTCTACCATCACTGGAAGAAAATTTATGGTGCAACATTCCTAGTTTGGTTTGGACCCACCGTGCGTCTCACCGTCTCTGATCCAGACCTCATCCGGGAAATCTTCACATCCAAGTCGGAATTTTACGAGAAAAACGAAGCTCCACCACTTGTGAAGCAGCTAGAAGGTGATGGCCTCCTTAGCCTCAAAGGAGAAAAATGGGCTCACCACCGAAAAATTATCTCTCCCACTTTTCACATGGAAAATCTAAAATTGCTGATACCGGTGATGGCAAGAAGCGTGGTTGATATGTTGGGAAAATGGTCGGCAATGGGTGAGGTCGAAATCGAAGTTTCGGAGTGGTTTCAAACCTTAACAGAAGATGTGATTACGAGGACGGCATTTGGAAGCAGCTACGAAGATGGCAAAGCCATTTTCCGATTACAAGCCGAACAAATGGACTTAGCTGCCGATGCTTTCCAAAAAGTATTCATTCCAGGTTACAGATTCTTTCCTACAAGGAGGAATATAAAATCTTGGAAATTGGACAAGGAAATTAAGAAATCGTTGGTGAAGCTGATCGAGCGACGGAGAGAGAATTCGTGTGGGAAGGAGGTGGAGAAAGGGCCAAAGGATTTGTTGGGGCTAATGATTCAGGCCTCGAACATGAATTCGTCCAATGTCACAGTGGATGACATCGTGGAAGAGTGCAAGAGCTTTTTCTTTGCAGGCAAACAGACCACATCCAACCTGCTGACGTGGACGACCATTCTCCTAGCTATGCACCCACACTGGCAGGTACGGGCACGTGACGAGGTTCTCAAGGTGTGTGGAGCACGTGACCTCCCCACCAAAGACCATGTTGCAAAGCTAAGGACGCTGAGTACCATTGTGAACGAGTCCTTAAGACTGTACCCGCCCACGATCGCCACAATCAGACGGGCGAAAACGGACGTGGAGTTGGGGGGCTACAAGATACCACGTGGCACGGAGCTGTTGATTCCAATCCTGGCCGTTCATCACGATCAAGCGATATGGGGGAACGATGCCACCGAGTTCAATCCTGGGCGTTTCTCCGATGGGGTCGCCCGCGCCGCGAAGCATCCTCTGGCGTTCATACCGTTTGGTCTCGGTGTGCGCACATGCATCGGACAAAACCTCGCAGTGCTACAAACCAAACTGGCCCTGGCAATCATACTGCAGCGTTTTAGTTTCAGGTTGGCCCCTAGTTATCAGCACGCACCAACGGTCCTGATGCTACTCTACCCTCAGTACGGCGCACCAATCATTTTCCAACACTTGTCACCAGTGGATCATCATGATCAAGGGTCCTCGTAG 1566 0.4987 MEDLFSSLKLLSLSFMLLLFLLKLTVLLWWRPRKIEGHFSKQGIRGPPYRFFIGNVKELVGMMLKASSQPMPFSHNILPRVLSFYHHWKKIYGATFLVWFGPTVRLTVSDPDLIREIFTSKSEFYEKNEAPPLVKQLEGDGLLSLKGEKWAHHRKIISPTFHMENLKLLIPVMARSVVDMLGKWSAMGEVEIEVSEWFQTLTEDVITRTAFGSSYEDGKAIFRLQAEQMDLAADAFQKVFIPGYRFFPTRRNIKSWKLDKEIKKSLVKLIERRRENSCGKEVEKGPKDLLGLMIQASNMNSSNVTVDDIVEECKSFFFAGKQTTSNLLTWTTILLAMHPHWQVRARDEVLKVCGARDLPTKDHVAKLRTLSTIVNESLRLYPPTIATIRRAKTDVELGGYKIPRGTELLIPILAVHHDQAIWGNDATEFNPGRFSDGVARAAKHPLAFIPFGLGVRTCIGQNLAVLQTKLALAIILQRFSFRLAPSYQHAPTVLMLLYPQYGAPIIFQHLSPVDHHDQGSS 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01107 521 Pfam Cytochrome P450 82 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01107 521 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01107 521 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01107 521 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01107 521 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01107 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Pumo4g01107 521 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 503 - -
Pumo4g01107 521 SUPERFAMILY Cytochrome P450 75 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01107 521 FunFam Cytochrome P450 734A1 29 511 - -
Pumo4g01107 521 CDD CYP734 82 504 - -
Pumo4g01107 521 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01107 521 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01107 521 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01107 521 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01107 521 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01107 521 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01107 521 Gene3D Cytochrome P450 29 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01107 Pumo-Chr4 14156817 14159800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01107 9 517 Cytochrome P450 AT2G26710 78.917 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01107 K15639 - gmx:100780027 929.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01107 4 14156817 14159800 Pumo4g01107 4 14156817 14159800 ECH