Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01104 ATGGAGGACAGAAAAGCCAACACAATCTCTTTTATATCAGTGATTGCACTGATCATTCTCATCATCGTTGCTCGTGTCTCCTTGAAGCTCTCAAGAGCCTTCTTCCTCATATGTGGCGCTTCTATTGCTGTGATCATCGCTGTCTTTTCTTGTGCATTCATAAGGCACCGTTACAACCGCAGAAGGAGGTTGTTGGAGTCACAGTTGAAGACAGAAGGGCGAGAGCTTCGAATAGAGTACAGTTTCTTAAGAAAAGTTGCTGGTGTTCCCACAAAGTATCGTTTCAAGGAGCTTGAGGAAGCAACGGATGGTTTTCAAGCACTTTTGGGAAAAGGGTCCTCTGCTTCGGTCTTCAAAGGCATTCTCAACGATGGAACTTCGGTTGCGGTGAAACGAATCGACGGAGAGGAGCGTGGGGATAAAGAATTCAGATCAGAAGTTGCAGCCATTGCTAGCGTGCACCATGTCAACCTTGTACGTATGTTTGGTTACTGTAACGCTCCCACGGCACCTAGGTACCTTGTTTATGAGTATATCCCAAACGGGTCTTTGGATTGTTGGATTTTTCCCCCAAGGGAAAATCGTGCACGTAGAAGTGGGTGTTTGCCGTGGAACTTGAGGTACAAGGTTGCTATTGATGTTGCAAAAGGGTTGTCTTATCTTCACCATGATTGTAGGAGGAGGGTTTTGCACCTTGATGTGAAGCCCGAGAATATTCTCTTGGATGAGAATTACAAGGCTCTTGTTTCTGATTTTGGTCTCTCAACCCTCGTTGGCAAGGATGTGAGTCAGGTCATGACAACAATGAGAGGGACAAGAGGGTACTTGGCTCCTGAATGGCTTTTGGAAAGAGGGGTGTCAGAAAAAACTGATATTTACAGTTATGGGATGGTTCTGTTGGAGATAATTGGAGGGAGAAGGAATGTGTCGAGGGTAGAGGATCCGAGGGACAGGACTAAGAAAAAGTGGGAGTTCTTTCCCAAGATTGTGAATGAGAAAGTGAGGGAGGGGAAGTTCATGGAGATTGTGGATCGTAGGTTGGTGGATCGTGGGGGTGTTGAGGAGAGTGAGGTTACTAGATTGGTGTATATTGCATTGTGGTGCATCCAAGAGAAGCCAAGGTTGAGGCCTAGCATGGCACAAGTGGTCGATATGCTTGAGAAGCGTGTGAGGGTGGATGAGCCACCTGGTTCCAGAATGATTCTTGTTGATTTACTTGCTGCTGATGAAGACCCTGCAGATCATCGAAATTTGGCAAGGTTGTTGACCTCTGTGTCCAGCCATATAGATTGTACATCTACTTACTCATTGGGAACCACAGCCACTATTTTATCTGGTAGATAG 1344 0.4598 MEDRKANTISFISVIALIILIIVARVSLKLSRAFFLICGASIAVIIAVFSCAFIRHRYNRRRRLLESQLKTEGRELRIEYSFLRKVAGVPTKYRFKELEEATDGFQALLGKGSSASVFKGILNDGTSVAVKRIDGEERGDKEFRSEVAAIASVHHVNLVRMFGYCNAPTAPRYLVYEYIPNGSLDCWIFPPRENRARRSGCLPWNLRYKVAIDVAKGLSYLHHDCRRRVLHLDVKPENILLDENYKALVSDFGLSTLVGKDVSQVMTTMRGTRGYLAPEWLLERGVSEKTDIYSYGMVLLEIIGGRRNVSRVEDPRDRTKKKWEFFPKIVNEKVREGKFMEIVDRRLVDRGGVEESEVTRLVYIALWCIQEKPRLRPSMAQVVDMLEKRVRVDEPPGSRMILVDLLAADEDPADHRNLARLLTSVSSHIDCTSTYSLGTTATILSGR 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01104 447 Gene3D Phosphorylase Kinase; domain 1 68 178 - -
Pumo4g01104 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Pumo4g01104 447 Gene3D Transferase(Phosphotransferase) domain 1 179 395 - -
Pumo4g01104 447 Pfam Protein kinase domain 108 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01104 447 SMART serkin_6 103 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01104 447 FunFam Putative receptor-like protein kinase 70 178 - -
Pumo4g01104 447 SUPERFAMILY Protein kinase-like (PK-like) 86 387 IPR011009 -
Pumo4g01104 447 FunFam Putative receptor-like protein kinase 179 394 - -
Pumo4g01104 447 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Pumo4g01104 447 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 32 396 - -
Pumo4g01104 447 ProSiteProfiles Protein kinase domain profile. 103 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01104 Pumo-Chr4 14100798 14105805 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01104 1 398 Receptor kinase-like Gene Family AT5G20050 63.840 1.54e-180 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo4g01104 Pkinase 6.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01104 - - gmx:100779485 825.854