Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo4g01097 | ATGAACACTACTATCACCACCGTCACCGCCATTACTACCACACGGGACGAACCCGACTACGACAGCAGCTCCTCCTCAATTACGGTACCGGAATCGAGCAGGAGCTGGATGACCAACCTGAGCTTCGGCAGCCGGCGACGCCGGAGCTCGGTCTCCGTCTGCTCGTCGACCGCGGAGAGTCCGCACGCCGCCGCGAAGCCCCACAAGGCAAACCAGGCTGCATGGGAGGCGATGCGGCGGCTCCGGCGGGACAAGGGGCAGGTGGGGCTGGACCACTTCCGGCTGCTGCGGCGGCTGGGGAGCGGCGACATCGGGAACGTGTATCTCTGCCAGATAAGGAACCCCGTGGTGGGGTTGCCGCAGTGCTTCTATGCGATGAAAGTGGTGGACAGAGAGGCACTTGCTATAAGGAAGAAGCTGCAGAGAGCGGAGATGGAGAAGGAGATTCTGGCCATGCTTGATCACCCCTTCTTGCCTACTTTGTACACCGAGTTTGACGCTTCTCATTACTCTTGCTTGGTCATGGAGTTCTGCCCCGGTGGAGACTTGTATGCTGCTCGCCAACGCCAGCCCGGGAAGCGCTTTTCCATAACATCCGCCAAGTTCTATGCGGCTGAGACGCTATTGGCATTAGAGTATCTTCACATGATGGGCATAGTGTACAGGGATTTGAAGCCAGAGAATGTGCTTGTGAGGGAGGATGGGCACATTATGCTTTCGGATTTTGATCTTTCGCTCAAATGCGACGTTGTTCCCAAGCTGTTAAGGAGCAAGACCAGATTGGAACGCAGCATCAAGAGTACAAAGAGATCTGTGCCAGCCTGCACTGCCCCCATGCAGCCTGTGCTGTCATGTTTCTTGTCATCAAGCAAGAAAAAGAAAGCGACCGTGACAACAGTTATAAGGGAAAATGTTGAGGTGGAAGAAAATGATCCGGAGCTGGTGGCCGAGCCCATTGATGCCAAGTCCAAGTCATTTGTGGGGACACATGAGTACTTGGCACCAGAAGTGATTCTGGGGCAAGGACATGGGAGTGCAGTGGATTGGTGGACTTTTGGGGTGTTCTTGTATGAGATGTTATATGGTAGAACACCCTTCAAAGGTGAAAATAATGAGAAAACTCTCGTCAACATTTTGAAGCAGCCCTTGGCTTTCCCTAGAATTGCAGTTAGCAGCAGCAAGGAGTTTGAAGAGATGGTCAAAGTTCAAGACCTTATAAGTAATCTTTTAGTGAAGAATCCAAATAAGAGAATTGGAAGCTGCATGGGTTCTGTTGAGATCAAAAGGCATGAGTTCTTCAAGGGTGTAAATTGGGCCTTAATTAGATCAGTTAGGCCCCCTGAGGTCCCTAGTGAAATGAACAAAATTAGGAGTAGGGTTTTGCTACCAAAACTAAGCAAATCAGACAGGGATCAGCCTTATCAGCTTAGAACTCATCATTTTGAATACTTCTAA | 1455 | 0.5093 | MNTTITTVTAITTTRDEPDYDSSSSSITVPESSRSWMTNLSFGSRRRRSSVSVCSSTAESPHAAAKPHKANQAAWEAMRRLRRDKGQVGLDHFRLLRRLGSGDIGNVYLCQIRNPVVGLPQCFYAMKVVDREALAIRKKLQRAEMEKEILAMLDHPFLPTLYTEFDASHYSCLVMEFCPGGDLYAARQRQPGKRFSITSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKTRLERSIKSTKRSVPACTAPMQPVLSCFLSSSKKKKATVTTVIRENVEVEENDPELVAEPIDAKSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLVNILKQPLAFPRIAVSSSKEFEEMVKVQDLISNLLVKNPNKRIGSCMGSVEIKRHEFFKGVNWALIRSVRPPEVPSEMNKIRSRVLLPKLSKSDRDQPYQLRTHHFEYF | 484 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo4g01097 | 484 | FunFam | protein kinase PINOID | 178 | 246 | - | - | |
Pumo4g01097 | 484 | ProSiteProfiles | Protein kinase domain profile. | 93 | 433 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo4g01097 | 484 | Gene3D | Transferase(Phosphotransferase) domain 1 | 320 | 451 | - | - | |
Pumo4g01097 | 484 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 219 | 231 | IPR008271 | GO:0004672|GO:0006468 | |
Pumo4g01097 | 484 | CDD | STKc_phototropin_like | 91 | 450 | - | - | |
Pumo4g01097 | 484 | SMART | serkin_6 | 93 | 433 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo4g01097 | 484 | PANTHER | FLIPPASE KINASE 1-RELATED | 38 | 454 | - | - | |
Pumo4g01097 | 484 | SUPERFAMILY | Protein kinase-like (PK-like) | 77 | 454 | IPR011009 | - | |
Pumo4g01097 | 484 | Gene3D | Phosphorylase Kinase; domain 1 | 91 | 177 | - | - | |
Pumo4g01097 | 484 | FunFam | serine/threonine-protein kinase D6PK-like | 321 | 451 | - | - | |
Pumo4g01097 | 484 | Gene3D | Transferase(Phosphotransferase) domain 1 | 178 | 247 | - | - | |
Pumo4g01097 | 484 | Pfam | Protein kinase domain | 94 | 248 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo4g01097 | 484 | Pfam | Protein kinase domain | 322 | 433 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo4g01097 | 484 | FunFam | protein kinase PINOID 2 | 91 | 177 | - | - | |
Pumo4g01097 | 484 | Coils | Coil | 126 | 146 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo4g01097 | Pumo-Chr4 | 14058242 | 14060111 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo4g01097 | 9 | 484 | AGC Kinase Gene Family | AT2G26700 | 58.459 | 0.0 | 589 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | AGC_RSK-2 | Pumo4g01097 | Pkinase | 7.2e-32 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo4g01097 | K08286 | - | gmx:100777988 | 884.789 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pumo4g01097 | 4 | 14058242 | 14060111 | Pumo4g01097 | 4 | 14058242 | 14060111 | ECH |