Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01057 ATGATGAGGGTGAGGAGAAAGATCGGGAAGTATGAGGTGGGTCGAACTATCGGCGAAGGCACGTTCGCCAAGGTTAAGTTCGCGAGAAGCACCGAGACAGGGGACAGTGTGGCTATTAAAGTGATGGCTAAGACCACCATTCTCCAGCACAGAATGGTTGAACAGATTAAAAGAGAGATATCCATTATGAAGATTGTCAGGCATCCTAATATAGTTAGATTGCATGAGGTTTTGGCTAGCCAGACCAAGATCTACATAATCCTTGAATTTGTAATGGGAGGGGAACTATATGACAAAATTGTTCAGCAGGGAAAGCTTTCTGAAAATGAATCTAGGCGCTACTTTCAACAACTTATAGACGCTGTTGATCATTGTCATAGAAAGGGTGTGTACCATAGAGACTTGAAGCCTGAAAACCTTCTTCTTGATGCTTACGGAAATTTGAAGGTTTCTGACTTTGGATTGAGTGCATTGACTAAGCAGGGTGATGACCTTCTTCACACCACTTGTGGGACCCCAAATTATGTTGCCCCTGAGGTGCTTGGCAATAGAGGATATGATGGTGCAGCAGCTGATGTTTGGTCATGTGGAGTCATCCTATATGTCCTAATGGCTGGATATCTTCCTTTTGAGGAGGCAGACCTTCCAACACTGTACAGAAGGATCAATGCTGCAGAATTTGTTTGCCCATTCTGGTTTTCTGCTGACACAATGTCATTCATAAAAAAAATTCTGGATCCTAATCCTAAAACACGGGTAAAAATTGAAGAAATAAGGAAAGATCCATGGTTCCAGAAAAACTATGTTCCTGTCAAACTCGGGGAAGACGAGCAAGTGAATTTGGATGATGTTCGGGCTGTTTTTGATGATATTGAGGACCAATATGTTGCTGAACGGTCAGAAATTACCGAGGGAGGTCCTCTGATAATGAATGCATTTGAGATGATTACCTTGTCACAAGGGTTGAATCTTTCACCACTATTTGATAGGCATCAGGATTATGTAAAGCGGCAAACTCGTTTTGTCTCCCGTAAACCAGCTAAAGTTATAATTTCTTCTATTGAAGCTGTTGCAGAGTCAATGGGTCTTAAGGTCCATTCTTGCAATTACAAGGTGAGGCTTGAAGGTGTTTCTGCAAAAAGGGTTGGACAATTTGCAGTGGTCTTGGAGGTGTTTGAAGTCGCACCATCCCTTTTCATGGTTGATGTTCGGAAGGCAGCTGGGGATACTTTTGACTACCACAAGTTTTACAAGAATTTTTGTGCCAAACTAGGAAACATTATTTGGAGACCGGCAGGGACTATGCCAAATTCTAATCTGCTCGAGCAAATGACTTTATAA 1341 0.4221 MMRVRRKIGKYEVGRTIGEGTFAKVKFARSTETGDSVAIKVMAKTTILQHRMVEQIKREISIMKIVRHPNIVRLHEVLASQTKIYIILEFVMGGELYDKIVQQGKLSENESRRYFQQLIDAVDHCHRKGVYHRDLKPENLLLDAYGNLKVSDFGLSALTKQGDDLLHTTCGTPNYVAPEVLGNRGYDGAAADVWSCGVILYVLMAGYLPFEEADLPTLYRRINAAEFVCPFWFSADTMSFIKKILDPNPKTRVKIEEIRKDPWFQKNYVPVKLGEDEQVNLDDVRAVFDDIEDQYVAERSEITEGGPLIMNAFEMITLSQGLNLSPLFDRHQDYVKRQTRFVSRKPAKVIISSIEAVAESMGLKVHSCNYKVRLEGVSAKRVGQFAVVLEVFEVAPSLFMVDVRKAAGDTFDYHKFYKNFCAKLGNIIWRPAGTMPNSNLLEQMTL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01057 446 Gene3D Transferase(Phosphotransferase) domain 1 3 309 - -
Pumo4g01057 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Pumo4g01057 446 Gene3D Kinase associated domain 1, KA1 310 430 - -
Pumo4g01057 446 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Pumo4g01057 446 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 415 - -
Pumo4g01057 446 SMART serkin_6 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01057 446 SUPERFAMILY Protein kinase-like (PK-like) 8 303 IPR011009 -
Pumo4g01057 446 ProSiteProfiles Protein kinase domain profile. 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01057 446 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Pumo4g01057 446 FunFam Non-specific serine/threonine protein kinase 4 305 - -
Pumo4g01057 446 Pfam NAF domain 307 366 IPR004041 GO:0007165
Pumo4g01057 446 CDD CIPK_C 311 421 - -
Pumo4g01057 446 FunFam Non-specific serine/threonine protein kinase 304 430 - -
Pumo4g01057 446 Pfam Protein kinase domain 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01057 446 FunFam Non-specific serine/threonine protein kinase 2 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01057 Pumo-Chr4 13584651 13592170 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01057 1 372 CBL-interacting serine-threonine protein kinases AT5G35410 73.387 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pumo4g01057 Pkinase 2.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01057 - - gmx:100811380 852.047