Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01049 ATGGCCAACGTGGAAATCTTCGTTCTACTTGTGGCAGCGGCATTAATGCCATTGCCACACACCACAGAAGCTGCAGAACATGTAGTGGGTGGTTCTGCCGGTTGGATTATTCCTCCCCAAGGACCTTCCTTCTATACCTCCTTCGCAGCTAATAACACATTCAGACTAAACGACACACTCGTCTTCAACTTCACAACAGGGTTTCACAACGTTGTCACCCTATCAAAGAAACACTTCGAGAGTTGCAACGTGAGTGAAACAATGGAATCATTCGACACAGCGCCAGCGAGAATCACTTTGAACCGCACCGGCGAGTTCTATTTCGCATGCGCGTTCCCGAGCCACTGCACCCGCGGCCAGAAGCTGAGCGTTCATGTCAGTTCTTCCCTTGAACCGGCCGAAGCTCCATTATCCCCACCTCCAGCTGCGTCACCTGCAGCCACGATGCCCCTTGCTGTCATTGTCCCTAGTACAGAAGCTAAAGATTACGAGGTGGGAGGTACCACAGGTTGGACTAGTTTTCCTCCTGGTGGTGCTTCTTTCTATTCCGAATGGGCTGCAAATTTTACATTCAAAGTAAATGACACTCTAGTCTTCAACTTTGAATCTGGAAGCCACAGTGTGGTGGAACTTACCAAGGCTAACTATGAAAAGTGTGAAGTTGATAACAATATAAAAGCCTTTAACAGAGGACCAGCTAGAATCACCCTGGATCGCCCAGGGGAATTCTACTTTTCCTGCTCCTTCTCAGGCCATTGCAGCAGTGGCCAAAAGCTAAGCATTAAAGTCACTGATTCTTCATCACCAGCACCACAGAAAGCTCCAGCTCAAGGTCCTTCAACTTCTCCTCTTGCACCACAAAATGCTCCAGCTGAAGGCCCTTCAGTTTCAGTCCCCAGTTCAGGTTCCAATGAAGGAGCTCCATCATCCCAAACTGAACCACCTCCTATAGCCCCTCCACCACAGGGCTCAGCCGCACCTCTTGCTGCTACCTTCTCTCTATTCCTCATCACCATTGCCATCAATTTTTTGTCTCAATTTTAG 1044 0.4885 MANVEIFVLLVAAALMPLPHTTEAAEHVVGGSAGWIIPPQGPSFYTSFAANNTFRLNDTLVFNFTTGFHNVVTLSKKHFESCNVSETMESFDTAPARITLNRTGEFYFACAFPSHCTRGQKLSVHVSSSLEPAEAPLSPPPAASPAATMPLAVIVPSTEAKDYEVGGTTGWTSFPPGGASFYSEWAANFTFKVNDTLVFNFESGSHSVVELTKANYEKCEVDNNIKAFNRGPARITLDRPGEFYFSCSFSGHCSSGQKLSIKVTDSSSPAPQKAPAQGPSTSPLAPQNAPAEGPSVSVPSSGSNEGAPSSQTEPPPIAPPPQGSAAPLAATFSLFLITIAINFLSQF 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01049 347 ProSiteProfiles Phytocyanin domain profile. 161 265 IPR003245 GO:0009055
Pumo4g01049 347 MobiDBLite consensus disorder prediction 260 324 - -
Pumo4g01049 347 SUPERFAMILY Cupredoxins 24 127 IPR008972 -
Pumo4g01049 347 SUPERFAMILY Cupredoxins 160 263 IPR008972 -
Pumo4g01049 347 Gene3D - 160 276 IPR008972 -
Pumo4g01049 347 Gene3D - 24 135 IPR008972 -
Pumo4g01049 347 Pfam Plastocyanin-like domain 40 120 IPR003245 GO:0009055
Pumo4g01049 347 Pfam Plastocyanin-like domain 180 257 IPR003245 GO:0009055
Pumo4g01049 347 PANTHER BLUE COPPER PROTEIN 162 275 IPR039391 GO:0009055
Pumo4g01049 347 ProSiteProfiles Phytocyanin domain profile. 25 128 IPR003245 GO:0009055
Pumo4g01049 347 MobiDBLite consensus disorder prediction 260 311 - -
Pumo4g01049 347 FunFam Blue copper 23 131 - -
Pumo4g01049 347 FunFam Blue copper 159 269 - -
Pumo4g01049 347 CDD Stellacyanin 161 263 - -
Pumo4g01049 347 ProSitePatterns Type-1 copper (blue) proteins signature. 104 120 IPR028871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01049 Pumo-Chr4 13470797 13475429 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01049 146 303 Phytocyanin Superfamily AT2G25060 36.709 2.36e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01049 - - gsj:114392869 314.694