Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01014 ATGGCTGTCACTGTGTTATTCTTGGTGCTATTGCTGCAACTGTGGACAGTTTTTGGCTCTGAGGTTGTCTTACAGTCAAGGGATTGTGGCAATGATTGGGTGGCACATTCATATTCTAGCCATGGTCAGGATCTGTTCTACATGAACGGCAATGTAGTGAACAAAGTTGCTTTCTGTGAGGCTCTCCAATTGTATATTGCAAAGGGGTGTGATGTGACGGACTACTTTGGAAGTGTCAAATGTGTGATGGATGACTCTTTTGCGAATTTACCTTTAAAGGCAGGGAGGAAACTTTTGCAGGATTTAATCAGTGAATCCACACCACAAGGAGATTCTAAGCATGTGTCATCCAAAATAGTTGGTATTGGTGCAGGGGGAGCTTTGTTGGTGTGTTGTGTTGTTCTTTGTCCTTGTTTCTATGCCAAGAGACGGAAAGCAACTTCTCATGCTGTTCTGGCCAAGGACCCAAATTCAATGGATTCAGTTTCCTCCTTCGAAGCCTCCGTTACTGATAAGATTCCAGCCAGTCCACTTCGGGTGCCACCTAGTCCGTCAAGATTCTCAATGTCTCCAAAACTCACTAGACTTCAATCATTGCATCTCAATCTGAACCAAGTTACAAGAGCTACCCAGAATTTCTCAGAAACATTACAAATAGGAGAAGGAGGTTTTGGAACTGTTTACAAGGCCAAGTTGGAAGATGGCCTGGTTGTGGCTGTAAAACGTGCAAAAAAGGAACATTTTGATAGTTTGAGGACAGAATTCAGCAGTGAAATTGAACTTTTGGCCAAAATTGATCATCGAAACCTGGTGAAGCTATTAGGTTATATTGATAAAGGAAATGAACGCCTTCTTATTACAGAGTTTGTGCCAAATGGTACTCTTAGAGAACATTTGGATGGTATGCGTGGAAAAATCCTAGACTTCAATCAACGCCTTGAAATTGCAATTGATGTTGCTCATGGCTTGACCTATCTGCATCTGTATGCAGAAAAGCAAATTATCCATCGAGATGTGAAATCATCCAACATTCTTCTGACAGAAAACATGCGAGCTAAAGTTGCTGATTTTGGATTTGCAAGGCTAGGACCAGTGAACACTGATCAGACACACATTTCTACCAAAGTGAAGGGAACAGTTGGTTATTTGGACCCTGAGTATATGAAAACATACCAACTCACTCCAAAGAGTGACGTTTACTCATTTGGAATTTTGCTTTTAGAAATTGTGACAGGCCGCCGTCCTGTGGAGTTGAAGAAAACTGTTGAAGAGCGGGTTACACTCAGATGGGCCTTCAGGAAGTATAATGAAGGAAGTGTGGTGGAACTGGTGGATCCTTTAATGGAAGAATCTGTAAATGGAGATGTTCTGATGAAGATGTTTGATTTGGCATTTCAATGTGCAGCACCCATTCGAGCAGATAGACCTGACATGAAATCGGTGGGCGAGCAATTGTGGGCAATAAGGGCAGATTACCTCAAGAGTGCAAGGAGAGAATAA 1500 0.422 MAVTVLFLVLLLQLWTVFGSEVVLQSRDCGNDWVAHSYSSHGQDLFYMNGNVVNKVAFCEALQLYIAKGCDVTDYFGSVKCVMDDSFANLPLKAGRKLLQDLISESTPQGDSKHVSSKIVGIGAGGALLVCCVVLCPCFYAKRRKATSHAVLAKDPNSMDSVSSFEASVTDKIPASPLRVPPSPSRFSMSPKLTRLQSLHLNLNQVTRATQNFSETLQIGEGGFGTVYKAKLEDGLVVAVKRAKKEHFDSLRTEFSSEIELLAKIDHRNLVKLLGYIDKGNERLLITEFVPNGTLREHLDGMRGKILDFNQRLEIAIDVAHGLTYLHLYAEKQIIHRDVKSSNILLTENMRAKVADFGFARLGPVNTDQTHISTKVKGTVGYLDPEYMKTYQLTPKSDVYSFGILLLEIVTGRRPVELKKTVEERVTLRWAFRKYNEGSVVELVDPLMEESVNGDVLMKMFDLAFQCAAPIRADRPDMKSVGEQLWAIRADYLKSARRE 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01014 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 334 346 IPR008271 GO:0004672|GO:0006468
Pumo4g01014 499 ProSitePatterns Protein kinases ATP-binding region signature. 219 245 IPR017441 GO:0005524
Pumo4g01014 499 CDD STKc_IRAK 219 485 - -
Pumo4g01014 499 SMART serkin_6 213 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01014 499 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 290 499 - -
Pumo4g01014 499 Gene3D Transferase(Phosphotransferase) domain 1 290 498 - -
Pumo4g01014 499 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 97 488 - -
Pumo4g01014 499 SUPERFAMILY Protein kinase-like (PK-like) 195 488 IPR011009 -
Pumo4g01014 499 ProSiteProfiles Protein kinase domain profile. 213 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01014 499 Pfam Protein tyrosine and serine/threonine kinase 218 485 IPR001245 GO:0004672|GO:0006468
Pumo4g01014 499 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 185 289 - -
Pumo4g01014 499 Gene3D Phosphorylase Kinase; domain 1 184 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01014 Pumo-Chr4 12935384 12940113 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01014 119 489 Receptor kinase-like Gene Family AT3G46290 40.800 1.27e-75 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Pumo4g01014 PK_Tyr_Ser-Thr 7.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01014 - - gmx:100798260 922.539