Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00997 ATGACTATTGGGATTGCAGTTGTTAGTTGGATTGCACTCCCAACTTCCTTCACTATCTTCAATTTTGGAGTGCAGAAAGATGTCAAGAATTGGCAGCTATTCTTGTGTGTTGCTGTTGGTCTTTGGGCAGGGCTTATTATCGGATTTGTAACTGAGTACTATACTAGCAATGCATATAGTCCGGTGCAAGACGTTGCAGACTCTTGCAGGACTGGTGCTGCAACTAACGTTATATTTGGCCTTGCCTTGGGATACAAGTCTGTTATTATTCCAATTTTTGCTATTGCAATTAGTATTTTTGTTAGTTTCACCTTTGCTGCCATGTATGGTATTGCCGTTGCTGCCCTTGGCATGCTGAGTACCATAGCCACCGGATTGGCCATTGATGCATATGGTCCAATCAGTGACAATGCTGGAGGTATTGCTGAGATGGCTGGTATGAGTCACAGAATTAGAGAGAGAACTGATGCCCTTGATGCTGCCGGAAACACAACTGCCGCTATTGGGAAGGGATTTGCCATTGGTTCTGCTGCTCTTGTATCTCTTGCCCTCTTTGGTGCCTTTGTGAGCCGTGCTGCTATTACAACTGTTGATGTGTTGACTCCAAAGGTTTTCATTGGTTTGATTGTGGGTGCAATGCTTCCTTACTGGTTTTCTGCCATGACAATGAAGAGTGTGGGAAGTGCTGCTCTGAAGATGGTTGAGGAAGTGCGCAGGCAATTCAACACCATTCCAGGATTGATGGAGGGAACTGCTAAGCCTGACTACGCCACATGTGTTAAGATCTCCACTGATGCTTCCATTAAAGAAATGATTCCACCTGGTGCTCTTGTCATGCTTACACCCCTTGTCGTTGGAATCCTTTTTGGTGTTGAAACACTTTCTGGTGTCCTCGCTGGATCTTTGGTGTCTGGTGTACAGATTGCTATCTCCGCATCCAACACCGGTGGTGCTTGGGATAATGCCAAGAAGTACATTGAGGCTGGTGCTTCTGAGCATGCAAGAAGCCTTGGTCCAAAAGGGTCAGATTGTCACAAGGCAGCTGTTATTGGTGACACCATTGGAGACCCTCTCAAGGATACATCTGGGCCTTCACTTAACATCCTTATCAAGCTGATGGCTGTTGAGTCTCTTGTGTTTGCTCCCTTCTTTGCTACACATGGTGGCCTACTCTTCAAGATCTAA 1185 0.4582 MTIGIAVVSWIALPTSFTIFNFGVQKDVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARSLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKI 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00997 394 NCBIfam V-type H(+)-translocating pyrophosphatase 1 390 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Pumo4g00997 394 Pfam Inorganic H+ pyrophosphatase 16 380 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Pumo4g00997 394 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 385 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00997 Pumo-Chr4 12787968 12789862 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00997 1 258 Primary Pumps ATPases AT1G15690 94.961 2.10e-172 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00997 K23025 - gmx:100775864 747.658