Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00976 ATGATCATGGGATACCAAAAGCCTGCATGGTTGGAAGCTCTTTACACAGAAAAGTTCTTCGTGGGGTGCTCTTACCATGAGAACGCTAAAAAGAATGAGAAGAATGTCTGCTGCTTAGATTGTTGCACCAGCATTTGTCCTCACTGCTTGCCATCTCATCGCTTCCACAGGCTTCTTCAGGTTCGCCGTTACGTTTATCATGATGTTGTTAGGTTGGAAGATCTTCAGAAACTCATTGACTGCTCCAACGTTCAGGCCTATACCATCAATAGTGCCAAGGTGGTGTTCATCAAGAAGAGACCTCAAAACCGGCAATTCAAAGGGTCAGGAAACTACTGCACCTCCTGTGATAGAAGCCTCCAAGAGCCTTTTATCCATTGCTCTCTTGGATGCAAGGTTGATTTTGTGCTGAAACACTACAAGGACCTCTCTCCCTACTTGAGGACATGCAACTCACTACAGCTAAGCCCTGACTTTCTGATCCCACAAGACATGGGGGATGAGGAGATGACTCGTTCAACTGTTGTGGATTGTGATGAACCAATGAGCTCATCTTCGGGGTCATCAGGGTCAGAGAACAACATGAGCATGGCTTGCACAGAGATTGTTAGGAAGAGAAGGAGTGGATGGAGCACTGTGTGTGCAAAATTCATGGCCAATAGCAATAAGGTTTCTGATGAAGACATGGCCACAAGCATGAGTAGAAGAAAAGGCATCCCTCATAGATCCCCTCTGTGTTAG 741 0.4602 MIMGYQKPAWLEALYTEKFFVGCSYHENAKKNEKNVCCLDCCTSICPHCLPSHRFHRLLQVRRYVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHYKDLSPYLRTCNSLQLSPDFLIPQDMGDEEMTRSTVVDCDEPMSSSSGSSGSENNMSMACTEIVRKRRSGWSTVCAKFMANSNKVSDEDMATSMSRRKGIPHRSPLC 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00976 246 MobiDBLite consensus disorder prediction 227 246 - -
Pumo4g00976 246 Pfam PLATZ transcription factor 62 133 IPR006734 -
Pumo4g00976 246 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 6 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00976 Pumo-Chr4 12574263 12576081 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pumo4g00976 PLATZ 4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00976 - - gmx:100785737 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00976 4 12574263 12576081 Pumo4g00976 4 12574263 12576081 ECH