Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00970 ATGACATTGACCAAAGAAGATGAATTCTTGATAATTGGCAGTGATGGAATCTGGGATGTTTTTCGCAGCCAAAATGCGGTGGACTTTGCTCGAAGGAGGCTTCAAGAGCACAATGATGTGAAGCAGTGTTGCAAGGAGATAATAGGGGAGGCAATAAAGAGAAGAGCAACTGACAACTTGACAGTGGTGATGATATGTTTTCACTCAGAACCACCACCTCCTGTGGTTGTAGAAAGGCCTAGATTCAGAAGAAGCATATCTGCTGAGGGACTTCAAAATATTAAGTCCTTGCTAGAAGGATAG 303 0.429 MTLTKEDEFLIIGSDGIWDVFRSQNAVDFARRRLQEHNDVKQCCKEIIGEAIKRRATDNLTVVMICFHSEPPPPVVVERPRFRRSISAEGLQNIKSLLEG 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00970 100 Gene3D - 1 71 IPR036457 -
Pumo4g00970 100 ProSiteProfiles PPM-type phosphatase domain profile. 1 67 IPR001932 -
Pumo4g00970 100 PANTHER PROTEIN PHOSPHATASE 3 66 IPR015655 GO:0004722|GO:0006470
Pumo4g00970 100 Pfam Protein phosphatase 2C 2 59 IPR001932 -
Pumo4g00970 100 SUPERFAMILY PP2C-like 2 69 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00970 Pumo-Chr4 12502418 12502720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00970 3 100 PP2C-type Phosphatase Gene Family AT2G25620 62.245 6.73e-41 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00970 K14803 - gmx:100782648 181.415