Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00962 ATGGCGTTTGATCAAAATTCCGTTCCGTTGGATCTTCGTCCGTTGAACGTGGCCGCGGCGGTGGCGGAGGAGCCGCTGATTTCGCCGGCCACCGTCACGCCGCCGACTCCGAATTCGATCGGCGAGCTTTTCTACCCGCCGTCGGCCTCCGCCGCCGCCGCCGCAACGTGGTGCGTCCGCCCCATTGCGCATCCCAACGTGAGCCCCGCGGCGGCGTTCGGGTTTAACTACGGCGGTTCCAGTTTTGGCAATCGCGTTGTGGCTGGGAATGCTTTGAATTTGGGAAAGTTATTAGGATGTAATGGATTGGACAAGGCCTGCAATGATGTGGATGGTTTTGGTTGTGGTGTTGGTGGTGTTAGGGGCAACAGAGGCGTTGGGAATGGCGGTGATCACGGCAGCGATGAGGGCGGTGGAGGTGGCGGCGGCGGCGATGATTCGGCCTCGGGGAGGAAGGTGAAGTTTCTGTGCAGTTTTGGTGGGAAGATTTTGCCTAGGCCTAGTGATGGAATGTTGAGATATGTTGGGGGGCAAACAAGGATCATTAGTGTTAGGAGAGATGTGAGTTTCAATGATTTGGTGCAGAAGATGGTTGACACTTATGGGCAGGCTGTGGTTATCAAGTATCAGCTTCCTGAGGAGGATCTTGATGCCTTGGTGTCTGTGTCTTGTCATGATGATGTTGAGAATATGATGGAGGAGTATGAAAAATTGGTTGAGAGGTCTCCTGATGGTTCTGCTAAGTTGAGAGTTTTTCTGTTTTCTGCTTCGGAGAGTGAATGTTCTGGTGGGGTGCAGTTTGGGGACTTGCAGGATACTGGGCAAAAATATTTTGATGCTGTGAATGGGATTGGAATTACAGACGGGATTGGGATTGGGGTTGGAGGTGGGATCAATAGGAAGGAGAGTGTTACAAGTGCCGCTTCAACACAGAATTCGGATTTTAGTGGGGCTGAGACTCTTGATAGTTCAATTGCTGGTCATGGGGATGTCAGTGGGGTGCCCTTGTCATCACCTAAGGAGAATGTCGCAGCAGCTTCTTCAGATGCAAGTGCTAATTTGGTGGTTTCAGAGGCCAGTGCACCGGTTTACTCGGGTGCTTCTGTGGTGTCGATGGCCATGCCTGTGGCTAAGACTAGTCCCACGCCAACCCATAATCTTTATTTTCATAATGAGGTTGAGTTAGAAAAGTCTGTGCCTGTTACTTTATCCCAGCAGCCGTTTGGATTGCAGCAATCTGGAACAGAAATTCCAACTCCTTCACCTTATTTGCAGCCTTTTGTTGATCCTGGCCAGGAGGTTATGAACCATGCAGATTATGTCCAGCTGTCTTCACAGATGGGGTTCACAAACCCTCAGCTTTTCGGAAAGACTGGGCACGTCTTTGCGCAACAGCAGTTTCATGATAATACTCCCGGTTTAGCATTCCATCATCAGGTCATTCCTGGGGTACAAAGGACAGTGGCTCAACCATCTTCTCATGTTGGGGTAAGACCGAATGTTGTTCAACCACAACAGTTGATGCAGCCACAGCAACATCTTTTGGATCAATACCATGATGAAAATACATCAGGCGTAAGGATTATCCAGCTTCCTGCTGAACGTAGCTACAACACATACCAGGTTCAAGTGAATCAAGTCCCACCTGTCATAGTTGGAGGCAATTATGGCTGGGTTCAGGTTCCTCCACAAGATTGCGTTGTTGTCTCTGATGGATTATTACCTCAACAACAGGTAATGATCCCTGAGAAAATCCGAAGAGCCGAGGACTGTTCTATGTGTCAGACAAAACTACCTCATGCACATTCAGATCCAGTAGTTCAGGATCAGCGCAATAGTGGTTCAGGTCCTATTCTTGATTCAACCCCAAGTCACCATAGTTTCCCAATGGAGGATAACATAAAGGCTCAAGCAGCAAATAGGATTATGCCAATGGTATCTACACCCTTGAAGGAAGGCATTGCTGAACAAGGGGCTGGGACCAGACCTAGGGTCGTTGGCAAATTGGAACCTCCTGATGGAGTACGTCATACCGAGACCAATGGGCTTTCTCATAATATTGAGCCACAGCCTGAAGGTGGGAGGATTTTTATACAAAAGCGAGAAGAATTTGATCATCCCGGGAACTCATTTTTCCAGGAAAAGATTGGAATGAAAGGCAGAAAACAATCTCCAAATGAGGAGCTCATGGGAACAACACCACTGTCTTATCTAGATGATGTTGGCAACCAGCACATGGTACCAGTTGAAAACTGGGTTAAACAGGATGTGCTTATTAACAAATCTGTCAATAATCATATACCTTTAGTTGAAGGAACATCTATAGAAACTTCAGAGTGTATGGTTCAAGGATCTCCAAAAGAATATACTAATGAGCTTACTGGGGTTGTTTCTAAATCAGATCCGATAGATAATTGGATTAGACAAGATCATCTAAAACCTATTGATGGAAGGATGGACACCTTAAAGATACCCAGTTCTGAAGTTTATGCAAGTAATGATTACTCTTATCTGCCAGTCGATAAATCCAGTGGGAATGATAAATTAGATTACAACACTCAGCACTCTGTAGAGGAAGAGGTGATTCTGGATAACAACTTTGGCAGGTCAAAACTGAGAGTTGATGCGAATCAAAATAAGATGACAGGTGTGCTGCCTTGTTCTTCTATGGAAATTTCATACAGGCACAATTCCAGGCCAGGGGAATGCAATGAGGCCACACAACCCCCTTTTTGGGGCATTCCTGGCCCAAATCCTCAATTGAATATTGGAAACCCCCACAAGGGTGATGCAGCACCATCTTCACCATCCCCATCTGTTAGGTTTGGAGATGTGCAGGATACTAGGAACTCACTTTTCAGCAATCAGGATCCCTGGAATATACAGCATGGTACCTTCTTTCCACCTGCTATACCTAGCAAAGCTGCTTTTAATAAAGAAACCTATTCTTGTAAGGATCCCTTTGGTGAGAATCCGGGCAACTTTCGGGAACAAAGTTTAGAAGCACAGTTGGATGATAGCCTCTACCAGTCATTCAAACAAAATTTAACTTTAGAACATGTTCGGTCTGCCAAAGGTTCAGCCGAAGACCAACAACTTCAAGCTGTTGCGGAAAATGTAGCAGCTTCTGTTTTGCACTCAAGAACTCCTTCAAATTCTGACTTGCATTCCGGAGATGTTTCCTGTTGCGAAAACATTGAGAATGGCAGTGTTCAAAACAATCCAATAGATGTAAAGTGTGGACATAAAACTCAGGATGTCAAGAGCAAGCAACTAGAAAAGGCAAATTTTGGCTTTCCAGCAACGGGTGTTGGAAAATTACAGGTTATAAAGAATTGTGATCTTGAAGAACAGACAGAACTGGGTTCTGGTACCTTTGGGACTGTATATCATGGAAAATGGAGGGGCACTGATGTTGCAATCAAGCGGATTACTGATAGGTGTTTTGCTGGAAAGCCTTCAGAGCAAGAGCGCATGAGAAATGACTTCTGGAATGAGGCAATCAAGCTTGCTGACTTGCACCATCCAAATGTGGTAGCTTTCTATGGTGTTGTGCTTGATGGCCCAGGAGGTTCTGTGGCAACAGTAACTGAGTATATGGTTAATGGTTCTTTGAGAAATGCCTTGCAGAAGAGTGAGAGGAATCTTGACAAGCGCAAGCGTCTTTTGATTGCAATGGATGTGGCCTTTGGCATGGAGTACCTACATGGAAAAAACATTGTACACTTTGACTTGAAAAGTGACAACTTGCTTGTGAATCTCCGAGATCCACACCGCCCAATATGCAAGGTTGGCGACTTGGGTCTGTCCAAAGTAAAATGTCAGACGCTGATCTCTGGTGGTGTGAGAGGAACTCTACCATGGATGGCTCCAGAACTGCTGAACGGAAGCAGTAGCCTTGTTTCAGAGAAGGTTGATGTGTTTTCATATGGTATTGTGATGTGGGAACTCTTGACTGGAGAGGAGCCATACGCTGACTTGCACTACGGCGCTATCATAGGTGGTATTGTGAGCAACACTTTGCGCCCTCCTGTTCCCGAATCTTGTGATCCAGAATGGAGATTGTTGATGGAGAGTTGCTGGTCATCAGAGCCATCAGAGAGACCTACCTTCACTGAGATTGCCAATGAATTGCGTTCTATAGCGTCCAAGATCTCTCCCAGAGGACAAAACTCTCCTAAAGGACAAAACCAACAGCTGCAACCCTCTCCGTTGCAGACTCAAGTCCACAAATGA 4236 0.462 MAFDQNSVPLDLRPLNVAAAVAEEPLISPATVTPPTPNSIGELFYPPSASAAAAATWCVRPIAHPNVSPAAAFGFNYGGSSFGNRVVAGNALNLGKLLGCNGLDKACNDVDGFGCGVGGVRGNRGVGNGGDHGSDEGGGGGGGGDDSASGRKVKFLCSFGGKILPRPSDGMLRYVGGQTRIISVRRDVSFNDLVQKMVDTYGQAVVIKYQLPEEDLDALVSVSCHDDVENMMEEYEKLVERSPDGSAKLRVFLFSASESECSGGVQFGDLQDTGQKYFDAVNGIGITDGIGIGVGGGINRKESVTSAASTQNSDFSGAETLDSSIAGHGDVSGVPLSSPKENVAAASSDASANLVVSEASAPVYSGASVVSMAMPVAKTSPTPTHNLYFHNEVELEKSVPVTLSQQPFGLQQSGTEIPTPSPYLQPFVDPGQEVMNHADYVQLSSQMGFTNPQLFGKTGHVFAQQQFHDNTPGLAFHHQVIPGVQRTVAQPSSHVGVRPNVVQPQQLMQPQQHLLDQYHDENTSGVRIIQLPAERSYNTYQVQVNQVPPVIVGGNYGWVQVPPQDCVVVSDGLLPQQQVMIPEKIRRAEDCSMCQTKLPHAHSDPVVQDQRNSGSGPILDSTPSHHSFPMEDNIKAQAANRIMPMVSTPLKEGIAEQGAGTRPRVVGKLEPPDGVRHTETNGLSHNIEPQPEGGRIFIQKREEFDHPGNSFFQEKIGMKGRKQSPNEELMGTTPLSYLDDVGNQHMVPVENWVKQDVLINKSVNNHIPLVEGTSIETSECMVQGSPKEYTNELTGVVSKSDPIDNWIRQDHLKPIDGRMDTLKIPSSEVYASNDYSYLPVDKSSGNDKLDYNTQHSVEEEVILDNNFGRSKLRVDANQNKMTGVLPCSSMEISYRHNSRPGECNEATQPPFWGIPGPNPQLNIGNPHKGDAAPSSPSPSVRFGDVQDTRNSLFSNQDPWNIQHGTFFPPAIPSKAAFNKETYSCKDPFGENPGNFREQSLEAQLDDSLYQSFKQNLTLEHVRSAKGSAEDQQLQAVAENVAASVLHSRTPSNSDLHSGDVSCCENIENGSVQNNPIDVKCGHKTQDVKSKQLEKANFGFPATGVGKLQVIKNCDLEEQTELGSGTFGTVYHGKWRGTDVAIKRITDRCFAGKPSEQERMRNDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALQKSERNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSYGIVMWELLTGEEPYADLHYGAIIGGIVSNTLRPPVPESCDPEWRLLMESCWSSEPSERPTFTEIANELRSIASKISPRGQNSPKGQNQQLQPSPLQTQVHK 1411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00962 1411 PANTHER SERINE-THREONINE PROTEIN KINASE 203 1382 - -
Pumo4g00962 1411 MobiDBLite consensus disorder prediction 654 691 - -
Pumo4g00962 1411 ProSiteProfiles Protein kinase domain profile. 1115 1381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g00962 1411 Pfam Protein tyrosine and serine/threonine kinase 1116 1378 IPR001245 GO:0004672|GO:0006468
Pumo4g00962 1411 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 172 256 - -
Pumo4g00962 1411 MobiDBLite consensus disorder prediction 124 147 - -
Pumo4g00962 1411 CDD PB1_UP2 156 254 - -
Pumo4g00962 1411 SMART serkin_6 1115 1386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g00962 1411 Gene3D - 173 256 - -
Pumo4g00962 1411 MobiDBLite consensus disorder prediction 309 336 - -
Pumo4g00962 1411 SMART PB1_new 167 256 IPR000270 GO:0005515
Pumo4g00962 1411 SUPERFAMILY CAD & PB1 domains 168 261 - -
Pumo4g00962 1411 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1203 1394 - -
Pumo4g00962 1411 MobiDBLite consensus disorder prediction 916 943 - -
Pumo4g00962 1411 Gene3D Phosphorylase Kinase; domain 1 1108 1202 - -
Pumo4g00962 1411 Gene3D Transferase(Phosphotransferase) domain 1 1203 1411 - -
Pumo4g00962 1411 SUPERFAMILY Protein kinase-like (PK-like) 1109 1377 IPR011009 -
Pumo4g00962 1411 CDD STKc_MAP3K-like 1121 1378 - -
Pumo4g00962 1411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1240 1252 IPR008271 GO:0004672|GO:0006468
Pumo4g00962 1411 PRINTS Tyrosine kinase catalytic domain signature 1349 1371 IPR001245 GO:0004672|GO:0006468
Pumo4g00962 1411 PRINTS Tyrosine kinase catalytic domain signature 1305 1327 IPR001245 GO:0004672|GO:0006468
Pumo4g00962 1411 PRINTS Tyrosine kinase catalytic domain signature 1197 1210 IPR001245 GO:0004672|GO:0006468
Pumo4g00962 1411 PRINTS Tyrosine kinase catalytic domain signature 1234 1252 IPR001245 GO:0004672|GO:0006468
Pumo4g00962 1411 ProSitePatterns Protein kinases ATP-binding region signature. 1121 1152 IPR017441 GO:0005524
Pumo4g00962 1411 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1108 1202 - -
Pumo4g00962 1411 Pfam PB1 domain 172 255 IPR000270 GO:0005515
Pumo4g00962 1411 MobiDBLite consensus disorder prediction 1382 1411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00962 Pumo-Chr4 12434788 12442621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00962 98 609 MAP Kinase Kinase Kinase AT3G46920 39.544 5.67e-84 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pumo4g00962 PK_Tyr_Ser-Thr 5.5e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00962 - - gmx:100819234 2192.16