Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00930 ATGTCTAGAAAACCCCCATTCCCTCGTCTCCTCCTTAACAATGTCTCTTGCATGAGAAATGCCCAGCAAGTTCTGCGTCATGTGAATGTCTCTCTTCATGATGGTGGGGCGCTTGTGCTAACAGGCGCAAATGGCTCGGGAAAGACAACTTTCCTGCGCATGTTAGCTGGGTTTTCTCATCCTTCCGCCGGTGAAATCCTTTGGAATGGCCATGACATTCAACAATCTACAATATTCCACCAGTATAAGCTTCAGCTTAACTGGCTCTCTCTCAAGGATGCCATTGATAATAAGATGACGGTTCTTAACAATGTACAATGGTTTGAACTTCTTGAAAACAAGGAAGGGAAGGCTATGGCTGCACTTGAGTTGATGGGACTCGGAAGATTAGCCAAAGAAAAACCAAGGATGCTATCTATGGGCCAGCGGAAAAGACTGCAACTTGCCAGATTGCTGGCAATTGATCGCCCCATATGGTTGCTAGACGAGCCTTCAGTTGCACTAGATGATGAAGGTGTGAAGTTGCTTGAGTATATCATTGCAGAACATAGGAAATATGGAGGAATTGTGATTGTGGCGACTCATCTACCCATTGAGATAGAAGATTCCATGGTCTTGAGGCTTCCACCAAGGTTTCCAAGGAGGATGACCCTTGTGGATATGCTTGACCGGGCAGATATCATCGTAGTACTGATCATGCTTGCATACTTGTCTGATGCCTTTGTTCTTGTTTCTTCCATAAAACATTTTCAAGAGGCCCTGAGAATCATATCTTCTTGGGGGCATTCGGGCTTAAGCTAA 801 0.4507 MSRKPPFPRLLLNNVSCMRNAQQVLRHVNVSLHDGGALVLTGANGSGKTTFLRMLAGFSHPSAGEILWNGHDIQQSTIFHQYKLQLNWLSLKDAIDNKMTVLNNVQWFELLENKEGKAMAALELMGLGRLAKEKPRMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVKLLEYIIAEHRKYGGIVIVATHLPIEIEDSMVLRLPPRFPRRMTLVDMLDRADIIVVLIMLAYLSDAFVLVSSIKHFQEALRIISSWGHSGLS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00930 266 SMART AAA_5 34 222 IPR003593 GO:0016887
Pumo4g00930 266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 201 IPR027417 -
Pumo4g00930 266 Pfam ABC transporter 25 165 IPR003439 GO:0005524
Pumo4g00930 266 NCBIfam heme ABC exporter ATP-binding protein CcmA 12 208 IPR005895 GO:0017004|GO:0022857
Pumo4g00930 266 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 10 234 IPR003439 GO:0005524
Pumo4g00930 266 Gene3D - 7 208 IPR027417 -
Pumo4g00930 266 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 5 222 IPR005895 GO:0017004|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00930 Pumo-Chr4 12051822 12052744 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00930 23 177 Calmodulin-binding Proteins AT2G36910 26.901 3.10e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00930 - - gmx:100796586 433.721