Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00918 ATGGCTATGCTTCGCAAATTGTTCTTCCGCAAGCCTCCTGAAGGCCTCCTCGAGATCTGCGAGAGAGTTTACGTTTTTGATTGCTGCTTCACCACGGATGCTTGGAATGAAGAGAATTACAGAGTGTACATGGATGGGATAGTTAGGCAACTTAGGGAGAACTTGCCTGATGCTTCCATTATGATTTTCAATTTTCGCGAGGAAGATACAAAGAGTCAGATGGCAAATATCATGTCTGAGTATGACATTACTATCATGGACTATCCTCGGCACTACGAGGGTGTTCCCGTGCTCAAAATGGAGCTCATTCACCACTTTTTGAGGTCTGGTGAAAGCTGGCTTTCGCTTAGCCAGCATAATGTGTTGCTGATGCATTGTGAACGTGGTGGTTGGCCTGTTTTGGCTTTCATGTTGGCTGCATTGTTGATTTATAGAAAGGTTTATACTGGGGAGCAGAGGACTCTGGATATGGTTTACAGGCAGGCTCCGCATGAGCTTTTGCATTTGTTGTCCCCGTTGAATCCGATCCCTTCCCAACTGAGGTATCTTCTGTATGTTTCCAGGAGGAATGTGGCCTTAGATTGGCCTCCCCTGGACAGGGCACTCATGTTGGACTGCATCATTCTCAGATTCTTCCCAAACTTTGATGGGGAAGGTGGTTGTCATCCCATTTTTAGAATTTATGGACAGGATCCCTTTAGTGCCGATAAAAATCCAAAAATGTTGTACTCAACGCCAAAGAGAAGCAAAAATGTCCGGGCCTATAAGCAGGGAGAGTGTGAACTTATTAAAATCGACATCAATTGCCATATTCAAGGTGATGTTGTCATTGAGAGCATTAACTTGAATGGTAACATGGAGCGCGAAAAGATGATGTTCCGAGTCCTGTTCAACACGGCTTTTGTTAGATCTAATATTTTGATGCTTAACCGGGATGAAATTGACATTTTATGGGATGCTAAAGATCACTTTCCAAAAGATTTTAGAGCCGAGATCCTTTTCTCAGAGATGGATGCTGCTGCAGCAGTTATTGCGGATGGTACCTCATGCTTTGAAGAGAAGGAAGGACTGCCAATGGAAGCATTTGCCAAGGTTCAAGAGATCTTTAGCCATGTAGACTGGATGAACCCCAAGGCTGATGCTGCACTAAATGTGCTTCAACAAATGAGTGCTTCAGCTCTGAATGACAGGTCGGATACAGTTTCTGATCAGTATGTGGAAAATGGCTCTTTATTGCATGAAACAAGTCCTAGAATGCCTCAGGGGAATTTGAATGAAGCAAGACAGTCTTTATCCTCAACTAAGAGATCCCCAGATAATGACATGAGTAGAAAAGAGGATAAGACCAACAAGGTCGAGGGTATTTCTCAACAACCTAGTACATCTAACATCATCCATCAAGAGACAACCAGATCTTCAGAGAGAACCTTGGAATCCAATAAATGTCCAACAGGACCGACAAATGTTGACATAAAATTGCAGGCACCTCATCCTGCTTTATCCTCTTCTCTTGATACTTCATTTTCCCCTAGAACACCTCCTTTGCGGCCTCAATCCACTAGTGCTAAAGAAGTTCATGATTCTCCTCGCCAAACAGAATCGCCCCCTTCTTATCTTTTGCCTTTGCAATCAAAACACCAATCACAAGACAGAAGTTCTATCCCTACACCTGGGACCCAATTGTCATCTACTTTTCATAGCAAGTCACCAGCTGACACCATTTCCCATCCTTCAGCTTCAGCAATTACTTCAACTCAGCCATCTCCTTTACTTTCTTCCAAAAATGTGAATGAGATTCCTCCTATTAGAACAAGACTAGAGTCTTCCCTGTCACGACCTCCAACTCCACCACCTCCTCCTACCCCTCCACTAAAGGATCATAGACTAGTTCGAGCTAGACCTCCTCCACCTCCACCTCCTCCTCCAAAGAAAGAACTACATGTTAAAGCCGAACCCCTTCCTTCTCCTCTATCTCCTGTGAATATGGAGCCACAGGTTAGAGATGGGCCCTCTCCTCCCCCTCCCCCTCCTCCTCCTCCAAAAGAGGAGCAACCTGTTACGTTTAATGCTCCTCCACCTCCCCCACCTCCTTGTCTCTCGGGGAAAGTTGCAGGTTCTACTATAGCACCACCACCACCACCAGCGCCTCCACCACCACTTTCCAGTGCAGCACTTTCCTCAGATCACACTAATTCTTCATTGCAAAAGTCTCCAACTCCTCCTGCAGCACCAGCTCCTCCACCTCCACCTGCAGCACCTGCTCCTCCACCTCCTCATGCAGCACCTGCTCCTCCACCTCCTCCTGGAGCACCTGCTCCTCCACCTCCTCCTGGTAAAGGAGGTCTAAAACCAGGCAGTCCATTTCCATTGTCTCTTGGAAATAATGTGTCAGGACCTCAATCTATTTCACCAAATAGCTCAAAGGGACGAATTCTATCACGTACGATCACCTCAAAGAATAACACCAAAAAATTGAAGCCATTGCATTGGTTGAAACTATCCAGAGCAGTGCAAGGAAGTTTGTGGGCTGAGACACAGAAATCTGGCGAAGCTTCCAAGGCCCCAGAGATTGATATGTCAGAGCTTGAGAGTCTCTTCTCAGCAGCAGTCCCAAGTTCAGGTCCTGCCAAAAAGTCAAATGTCCAAAGCTCAGCTGGCCCTAAATCTGAAAAAGTGCAACTGATTGAACATAGGCGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAAGTGCCATTGCATGATTTAATGAGCTCAGTGCTAGCACTGGAGGAATCAGCACTAGACACTGATCAGGTTGAGAACCTCATAAAGTTTTGTCCTACAAAAGAGGAGATGGAATTACTCAAGGGTTATAATGGGGAAAAGGAGAAGTTAGGAAGATGCGAACAGTTCTTAATGGAATTGATGAAAGTACCACGGGTGGAATCCAAGCTCAGAGTTTTTTCATTCAAGATTCAGTTCAACTCTCAGGTTTCTGACCTTAGAAATAGCCTGAGTGTTGTGAATGCTGCTGCAGAAGAGATCAGGAATTCTGTCAAATTAAAGAGAATTATGCAAACAATACTTTCTTTAGGAAATGCTTTGAATCAAGGAACTGCCAAGGGTTCTGCTATTGGATTCAGATTGGATAGCCTTCTTAAACTCACGGAGACACGTGCACGGGACAAGAAGATGACTCTCATGCATTATCTTTGTAAGGTGCTAGATGACCAACTACCGGAAGTTTTAGACTTCTCCAAGGATCTTGCTAACCTAGAGCCAGCAGCAAAGATCCAATTGAAGTTTTTGGCTGAGGAGATGCAAGCTATAAACAAAGGATTAGAAAAAGTGGTACAGGAACTATCAACCTCTGAAAATGACGGGCCTATATCAGAAACTTTCCGCGATAAATTGAAAGAATTCCTTGGTTCTGCTGAAGCTGATGTCCGTTCATTGGCTTCACTATATTCCAGCGTGGGTAGGAACGTGGATAAATTGATTCTCTATTTTGGTGAAGATCCATCTCGTTGCCCATTTGAGCAAGTTGTGTCAACTTTACTCAACTTTACTAGGATGTTCAACAAAGCCCATGAAGAAAACCGCAAGCAGCTAGAGCTTGAAATGAAGAAAGCCGCAGAAAGTGAGAAAAAGAAATGTGAATCAGAAAGAATTTTACCTACAGCTATCCGGACTGGCAATGTCAAATAG 3693 0.4435 MAMLRKLFFRKPPEGLLEICERVYVFDCCFTTDAWNEENYRVYMDGIVRQLRENLPDASIMIFNFREEDTKSQMANIMSEYDITIMDYPRHYEGVPVLKMELIHHFLRSGESWLSLSQHNVLLMHCERGGWPVLAFMLAALLIYRKVYTGEQRTLDMVYRQAPHELLHLLSPLNPIPSQLRYLLYVSRRNVALDWPPLDRALMLDCIILRFFPNFDGEGGCHPIFRIYGQDPFSADKNPKMLYSTPKRSKNVRAYKQGECELIKIDINCHIQGDVVIESINLNGNMEREKMMFRVLFNTAFVRSNILMLNRDEIDILWDAKDHFPKDFRAEILFSEMDAAAAVIADGTSCFEEKEGLPMEAFAKVQEIFSHVDWMNPKADAALNVLQQMSASALNDRSDTVSDQYVENGSLLHETSPRMPQGNLNEARQSLSSTKRSPDNDMSRKEDKTNKVEGISQQPSTSNIIHQETTRSSERTLESNKCPTGPTNVDIKLQAPHPALSSSLDTSFSPRTPPLRPQSTSAKEVHDSPRQTESPPSYLLPLQSKHQSQDRSSIPTPGTQLSSTFHSKSPADTISHPSASAITSTQPSPLLSSKNVNEIPPIRTRLESSLSRPPTPPPPPTPPLKDHRLVRARPPPPPPPPPKKELHVKAEPLPSPLSPVNMEPQVRDGPSPPPPPPPPPKEEQPVTFNAPPPPPPPCLSGKVAGSTIAPPPPPAPPPPLSSAALSSDHTNSSLQKSPTPPAAPAPPPPPAAPAPPPPHAAPAPPPPPGAPAPPPPPGKGGLKPGSPFPLSLGNNVSGPQSISPNSSKGRILSRTITSKNNTKKLKPLHWLKLSRAVQGSLWAETQKSGEASKAPEIDMSELESLFSAAVPSSGPAKKSNVQSSAGPKSEKVQLIEHRRAYNCEIMLSKVKVPLHDLMSSVLALEESALDTDQVENLIKFCPTKEEMELLKGYNGEKEKLGRCEQFLMELMKVPRVESKLRVFSFKIQFNSQVSDLRNSLSVVNAAAEEIRNSVKLKRIMQTILSLGNALNQGTAKGSAIGFRLDSLLKLTETRARDKKMTLMHYLCKVLDDQLPEVLDFSKDLANLEPAAKIQLKFLAEEMQAINKGLEKVVQELSTSENDGPISETFRDKLKEFLGSAEADVRSLASLYSSVGRNVDKLILYFGEDPSRCPFEQVVSTLLNFTRMFNKAHEENRKQLELEMKKAAESEKKKCESERILPTAIRTGNVK 1230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00918 1230 MobiDBLite consensus disorder prediction 666 700 - -
Pumo4g00918 1230 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Pumo4g00918 1230 MobiDBLite consensus disorder prediction 453 487 - -
Pumo4g00918 1230 MobiDBLite consensus disorder prediction 611 625 - -
Pumo4g00918 1230 Gene3D Formin, FH2 domain 814 1199 IPR042201 -
Pumo4g00918 1230 MobiDBLite consensus disorder prediction 873 889 - -
Pumo4g00918 1230 SMART it6_source 815 1230 IPR015425 -
Pumo4g00918 1230 MobiDBLite consensus disorder prediction 790 820 - -
Pumo4g00918 1230 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Pumo4g00918 1230 ProSiteProfiles Formin homology-2 (FH2) domain profile. 815 1214 IPR015425 -
Pumo4g00918 1230 MobiDBLite consensus disorder prediction 438 452 - -
Pumo4g00918 1230 Pfam Formin Homology 2 Domain 819 1188 IPR015425 -
Pumo4g00918 1230 MobiDBLite consensus disorder prediction 412 820 - -
Pumo4g00918 1230 Coils Coil 1095 1115 - -
Pumo4g00918 1230 MobiDBLite consensus disorder prediction 723 738 - -
Pumo4g00918 1230 MobiDBLite consensus disorder prediction 739 783 - -
Pumo4g00918 1230 Gene3D - 196 340 - -
Pumo4g00918 1230 MobiDBLite consensus disorder prediction 869 890 - -
Pumo4g00918 1230 MobiDBLite consensus disorder prediction 707 721 - -
Pumo4g00918 1230 Coils Coil 1189 1209 - -
Pumo4g00918 1230 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 337 IPR035892 -
Pumo4g00918 1230 SMART PTEN_C2_2 197 336 IPR014020 -
Pumo4g00918 1230 Gene3D Protein tyrosine phosphatase superfamily 14 191 IPR029021 -
Pumo4g00918 1230 MobiDBLite consensus disorder prediction 499 610 - -
Pumo4g00918 1230 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
Pumo4g00918 1230 SUPERFAMILY Formin homology 2 domain (FH2 domain) 764 1206 - -
Pumo4g00918 1230 PANTHER FORMIN-J 1 720 - -
Pumo4g00918 1230 MobiDBLite consensus disorder prediction 412 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00918 Pumo-Chr4 11908492 11919111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00918 797 1213 Protein tyrosine phosphatase (PTP) family AT5G58160 75.418 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00918 - - gmx:100786096 2103.95