Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00911 ATGGCTGAGCGCCGCAGCCCCGAACCTCTCCCAGAGCCAGACTCCAAAGGAAACGATTCTCACCAAAAACCGCAGGAACGGGTCGCCGAATCGCCGTCCGCTACCGAGTCTCAGCGCGGCGAGTTACGGAGTTCCGACGAACCTCGTACGGAGTCCAATTTAGAAACCCTAGGCGGTGCTGTTCCCTCTTCGGTTCAAACCCTTGCTGTGCAGCATCGGAGTGACGATTTGCAAGGGAGCTCTACTGCGCCGAATTCGGGTGGCAAAGCCGAAAGTAAGGAGACAGTTGGACCTCCTGAAAAGGAAATTATTGAAAGAGGAGCAGCCCAGCCACTCCAAACTCAGACAGAAATTCGGCTTCAGGTGTCTGCGTGTTCAACTCCATTGTCTGAACTATCACCAACTTCTGTTACACAATCTCTATCATCTGTTTCTAGTCCAACTGTACCAAAACAGAAAATATCTAATCCAAAGGCCAACAACGCACATGTGGTAGAAGTAGATAAGAAAACTCCTTCTGGTGGCAAAACATTATCTGCTGTTTCTGTTGCAAGGACATCAGCATCTGATGGATACAACTGGCGGAAGTATGGTCAGAAGCAAGTGAAGAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACTCATTCAGACTGTTGTGCTAAGAAGATTGAATGCTGTGATGATTCAGGTCATGTGATCGAGATTGTTTATAAAAGTGAGCACAGTCATGATCCCCCGCGGAAGACTAATTCCATTAGGGAAAGTAAGTTACTGTCTTCCAGTGAACCTATTTTAGAAAACAGTGTTCCAGCGCAGCCTGTCAGAGTTCTGAAGGATCCTGATCCATCTATTTCTTCAAAAGAATCTCTACAAGAAGCACCCTGCAGCACTGATAGGAAACGACAAAACTCATCTAATATCAGTGGTAATGGTAAAGTTATTTTGAAAGAAGAACATGTAAATGAGCCAGAGCCGAAAAAAAGAATGAAGAAAGGTGACTTAACAGACATGGATTCTCTCTTAAAACCTGGAAAGAAGCCCAAGTTTGTCGTACATGCAGCGGGGGATGTGGGGATATCTGGTGATGGTTACCGATGGCGCAAGTATGGGCAGAAAATGGTGAAGGGAAATCCACATCCCAGGAACTACTACAGATGCACTTCTGCTGGTTGTCCTGTCAGAAAGCACATTGAAACCGCTGTAGATAACTCAGATGCTGTCATCATAACATACAAGGGTGTACATGACCATGACATGCCTGTGCCCAAGAAACGACATGGGCCACCAAGCGCTCCTCTTGTGGCTGCTGCAGCACCTGCCTCCATGAACAGTTTGCAGGTGAAGAAACCCGATTCCCCACAAAACAAGAAAATTTCTACTCAATGGTCAGTGGACACCGAAGGAGAACTAACTGGGGAAGCCCTGGAGCTTGGGGGTGAGAAAGCAATGGAGTCGGCTCGAACGCTTCTGAGCATAGGTTTTGAAATTAAGCCTTGCTGA 1503 0.4704 MAERRSPEPLPEPDSKGNDSHQKPQERVAESPSATESQRGELRSSDEPRTESNLETLGGAVPSSVQTLAVQHRSDDLQGSSTAPNSGGKAESKETVGPPEKEIIERGAAQPLQTQTEIRLQVSACSTPLSELSPTSVTQSLSSVSSPTVPKQKISNPKANNAHVVEVDKKTPSGGKTLSAVSVARTSASDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCCAKKIECCDDSGHVIEIVYKSEHSHDPPRKTNSIRESKLLSSSEPILENSVPAQPVRVLKDPDPSISSKESLQEAPCSTDRKRQNSSNISGNGKVILKEEHVNEPEPKKRMKKGDLTDMDSLLKPGKKPKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSDAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPASMNSLQVKKPDSPQNKKISTQWSVDTEGELTGEALELGGEKAMESARTLLSIGFEIKPC 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00911 500 SUPERFAMILY WRKY DNA-binding domain 185 247 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo4g00911 500 FunFam WRKY transcription factor 348 422 - -
Pumo4g00911 500 SMART WRKY_cls 361 420 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo4g00911 500 SMART WRKY_cls 188 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo4g00911 500 MobiDBLite consensus disorder prediction 56 89 - -
Pumo4g00911 500 MobiDBLite consensus disorder prediction 130 157 - -
Pumo4g00911 500 MobiDBLite consensus disorder prediction 241 336 - -
Pumo4g00911 500 MobiDBLite consensus disorder prediction 1 115 - -
Pumo4g00911 500 MobiDBLite consensus disorder prediction 1 26 - -
Pumo4g00911 500 ProSiteProfiles WRKY domain profile. 183 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo4g00911 500 MobiDBLite consensus disorder prediction 285 312 - -
Pumo4g00911 500 ProSiteProfiles WRKY domain profile. 356 421 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo4g00911 500 MobiDBLite consensus disorder prediction 253 268 - -
Pumo4g00911 500 MobiDBLite consensus disorder prediction 316 336 - -
Pumo4g00911 500 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 147 448 IPR044810 GO:0003700
Pumo4g00911 500 SUPERFAMILY WRKY DNA-binding domain 357 421 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo4g00911 500 Gene3D WRKY domain 175 248 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo4g00911 500 Gene3D WRKY domain 346 422 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo4g00911 500 Pfam WRKY DNA -binding domain 190 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo4g00911 500 Pfam WRKY DNA -binding domain 363 418 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00911 Pumo-Chr4 11804366 11808982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00911 127 500 WRKY Transcription Factor Family AT4G30935 57.784 3.58e-139 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo4g00911 WRKY 2.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00911 - - gmx:100127377 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00911 4 11804366 11808982 Pumo4g00911 4 11804366 11808982 ECH